update tests to reflect dirs

kedhammar · Dec 10, 2024 · 7fdc1c2 · 7fdc1c2
1 parent 7dff61e
commit 7fdc1c2
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Showing 2 changed files with 4 additions and 3 deletions.
diff --git a/tests/conftest.py b/tests/conftest.py
@@ -27,7 +27,8 @@ def create_dirs():
         │   └── promethion
         ├── ngi-internal
         │   ├── minknow_reports
-        │   └── toulligqc_reports
+        │   └── other_reports
+        │       └── toulligqc_reports
         ├── ngi-nas-ns
         │   ├── Aviti_data
         │   ├── NextSeq_data
@@ -95,7 +96,7 @@ def create_dirs():
 
     # GenStat
     os.makedirs(f"{tmp.name}/ngi-internal/minknow_reports")
-    os.makedirs(f"{tmp.name}/ngi-internal/toulligqc_reports")
+    os.makedirs(f"{tmp.name}/ngi-internal/other_reports/toulligqc_reports")
 
     # Misc. ONT dirs/files
     os.makedirs(f"{tmp.name}/log")

diff --git a/tests/nanopore/test_ONT_run_classes.py b/tests/nanopore/test_ONT_run_classes.py
@@ -50,7 +50,7 @@ def make_ONT_test_config(tmp: tempfile.TemporaryDirectory) -> dict:
                 anglerfish_samplesheets_dir: {tmp.name}/ngi-nas-ns/samplesheets/anglerfish
                 anglerfish_path: mock
     minknow_reports_dir: {tmp.name}/ngi-internal/minknow_reports/
-    toulligqc_reports_dir: {tmp.name}/ngi-internal/toulligqc_reports/
+    toulligqc_reports_dir: {tmp.name}/ngi-internal/other_reports/toulligqc_reports/
     toulligqc_executable: toulligqc
     rsync_options:
         '-Lav': None