0.4.1-dev

• Genbank download code moved out of the repo
• Updates to GenomeAnnotation API based on type changes
  • Check Genome for an Assembly reference or a ContigSet reference
  • Check Genome for a Taxon reference
• Bugfixes
  • Corrected issue when workspace return was empty because keys didn't exist
  • Corrected issues introduced from last wave of changes to id filter checks
  • README had incorrect branch for codecov badge
  • Removed obsolete Thrift references from README

Workspace client updates

• updated workspace client to 0.5.0-dev5
• workspace mock updated
• added ancestor_refchain as optional argument to ObjectAPI constructor to support workspace reference chain following
• removed thrift services and clients, updated repo accordingly

Bugfix and update for get_features() with exclude_sequence

• get_features() for GenomeAnnotation was missing the feature_function data when exclude_sequence was True
• added original DNA sequence length to output of get_features() when exclude_sequence is True
• performance collection methods disabled for Data API methods

GenomeAnnotation get_features() exclude_sequence

Added option to get_features() to exclude_sequence data from the result, reducing data transfer if you just want a summary of the features without sequence.

Converters to old object types and to common file formats

Starting to roll forward again with release versions

Initial alpha release of Data API

Python library and tests work for Genome, GenomeAnnotation, and Taxon APIs.
Thrift wrappers can generate clients and servers, but this is only partially tested with the Taxon API.