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@briehl briehl released this 31 Oct 18:23
· 399 commits to main since this release
v5.1.3
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Version 5.1.3

  • PTV-1620 - fix problem with Expression Pairwise Correlation creating or displaying large heatmaps and freezing or crashing browser
  • PTV-1514 - sanitized HTML being used for app input tooltips

Dependency Changes

  • Python dependency updates
    • black >=20.8b1 -> 22.8.0
    • coverage 6.2 -> 6.4.4
    • cryptography 37.0.4 -> 38.0.1
    • flake8 3.8.4 -> 5.0.4
    • jinja2 3.0.3 -> 3.1.2
    • jupyter-console 6.4.3 -> 6.4.4
    • pygments 2.12.0 -> 2.13.0
    • requests 2.27.1 -> 2.28.1
  • Javascript dependency updates
    • @wdio/cli 7.19.6 -> 7.25.0
    • @wdio/local-runner 7.19.5 -> 7.25.0
    • @wdio/spec-reporter 7.19.5 -> 7.25.0
    • bootstrap 3.3.7 -> 3.4.1
    • bootstrap-slider 10.6.2 -> 11.0.2
    • chrome-launcher 0.14.2 -> 0.15.1
    • chromedriver ^101.0.0 -> ^105.0.0
    • cssnano 5.1.7 -> 5.1.13
    • jasmine-core 4.1.0 -> 4.3.0
    • jquery-ui 1.13.1 -> 1.13.2
    • karma-jasmine-html-reporter 1.7.0 -> 2.0.0
    • postcss-cli 9.1.0 -> 10.0.0
    • prettier 2.4.1 -> 2.7.1
    • puppeteer 13.7.0 -> 18.0.5
    • require-css 0.1.8 -> 0.1.10
    • sass 1.51.0 -> 1.55.0
    • selenium-standalone 8.1.1 -> 8.2.0
    • selenium-webdriver 4.1.2 -> 4.4.0
    • terser 5.13.1 -> 5.15.0
    • underscore 1.13.3 -> 1.13.6

Removed dependencies
note a number of these were removed from the narrative, but left in the narrative base image. The requirements.txt in this repo is intended for those packages required for the narrative to run. Any other packages, including scientific programming ones, useful for either KBase Apps or other manual use in Narrative code cells are included in the narrative base image (see narrative-base-image for more details). Also note that most of these are duplicated and included in that image - these are still necessary for narrative functionality when installed locally (i.e. not in a Docker image), so they're left in.

  • plotly - not necessary for core narrative functionality, moved to narrative base image
  • semantic_version -- removed, wasn't used effectively, and removed the need for it
  • sklearn - still included, installed manually alongside clustergrammer in the install script, so the requirements.txt was removed
  • sympy - not necessary for core narrative functionality, moved to narrative base image
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