Heyo, 👋

I'm Jonas, I am a Bioinformatician with a wide interest, but mainly focussed on transcriptomics. I have major experience are with R (especially the tidyverse) and python in a Linux environment. While I don't have as much experience with low-level languages, I am interested in deepening my understanding of Rust (and perhaps C++).

In my Master thesis project at the MDC's BIMSB Bioinformatics platform I investigated the feasibility of using linear deconvolution models to improve the prediction accurracy of methods involving bulk RNA-seq data of tumor samples (repo).

In a previous project, I worked to improve code quality and prediction accurracy of the PiGx-SARS-Cov-2 pipeline.

I did my Bachelor's degree at the University of Tübingen, focusing on phenological shifts of plants and their pollinators. I investigated the results further leading to my first published paper, the analysis code of which can be found here.