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@johannessonlab

Johannesson Lab

Research group at the Department of Ecology, Environment and Plant Sciences (DEEP), Stockholm University

Popular repositories Loading

  1. InvDeNovo InvDeNovo Public

    Python scripts for identifying inversions in fragmented de novo genome assemblies

    Python 3 1

  2. SpokBlockPaper SpokBlockPaper Public

    Scripts and snakemake pipelines associated with the Spok Block paper

    Python 2

  3. johannessonlab.github.io johannessonlab.github.io Public

    Repo hosting the Johannesson lab web page

    SCSS 2 1

  4. Letharia Letharia Public

    All scripts and pipelines related to inferring ploidy, hybridization and MAT locus architecture in the lichen symbionts from the genus Letharia

    R 1

  5. intermedia_spore_killer intermedia_spore_killer Public

    Scripts released with the paper Svedberg et al. "Convergent evolution of complex genomic rearrangements in two fungal meiotic drive elements".

    Python

  6. SpokPaper SpokPaper Public

    Scripts and snakemake pipelines associated with the paper of Vogan & Ament-Velasquez et al. "Combinations of Spok genes create multiple meiotic drivers in Podospora"

    Python 1

Repositories

Showing 10 of 11 repositories
  • johannessonlab.github.io Public

    Repo hosting the Johannesson lab web page

    johannessonlab/johannessonlab.github.io’s past year of commit activity
    SCSS 2 BSD-3-Clause 1 0 1 Updated Dec 20, 2024
  • basidiomycetes_germline Public

    Germline sequestration in a basidiomycete fungus

    johannessonlab/basidiomycetes_germline’s past year of commit activity
    HTML 0 0 0 0 Updated Dec 5, 2024
  • HetVPaper Public

    Scripts and pipelines for the Ament et al. (2022) NEE paper on allorecognition genes and reproducive isolation

    johannessonlab/HetVPaper’s past year of commit activity
    R 0 MIT 0 2 0 Updated Aug 8, 2024
  • Letharia Public

    All scripts and pipelines related to inferring ploidy, hybridization and MAT locus architecture in the lichen symbionts from the genus Letharia

    johannessonlab/Letharia’s past year of commit activity
    R 1 MIT 0 0 0 Updated Dec 23, 2022
  • SpokBlockPaper Public

    Scripts and snakemake pipelines associated with the Spok Block paper

    johannessonlab/SpokBlockPaper’s past year of commit activity
    Python 2 MIT 0 0 0 Updated May 22, 2021
  • sitophila_spore_killer Public

    Scripts used in "An introgressed gene causes meiotic drive in Neurospora sitophila"

    johannessonlab/sitophila_spore_killer’s past year of commit activity
    Python 0 0 0 0 Updated Dec 22, 2020
  • PodoHetsPaper Public

    Scripts and pipelines of Ament et al. (prep) paper on het genes in the Podospora anserina species complex

    johannessonlab/PodoHetsPaper’s past year of commit activity
    Python 0 MIT 0 2 0 Updated Apr 2, 2020
  • Marasmius_mutation_paper Public

    Scripts used for the Marasmius oreades mutation paper by Hiltunen et al (in prep)

    johannessonlab/Marasmius_mutation_paper’s past year of commit activity
    Python 0 MIT 2 0 0 Updated Dec 17, 2019
  • SpokPaper Public

    Scripts and snakemake pipelines associated with the paper of Vogan & Ament-Velasquez et al. "Combinations of Spok genes create multiple meiotic drivers in Podospora"

    johannessonlab/SpokPaper’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Aug 6, 2019
  • InvDeNovo Public

    Python scripts for identifying inversions in fragmented de novo genome assemblies

    johannessonlab/InvDeNovo’s past year of commit activity
    Python 3 1 0 0 Updated Mar 28, 2019
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