FateMapper is tool to analyze clone distribution, lineage similarity, and clone fate bias based on single cell lineage tracing (scLT) data.
You can install the development version of FateMapper from GitHub with:
# install.packages("devtools")
devtools::install_github("jiang-junyao/FateMapper")The document and tutorial of FateMapper can be found at https://jiang-junyao.github.io/FateMapper/; The web tool version of FateMapper can be found at scLT
Jiang, J., Ye, X., Kong, Y., Guo, C., Zhang, M., Cao, F., Zhang, Y., & Pei, W. (2024). scLTdb: a comprehensive single-cell lineage tracing database. Nucleic acids research. https://doi.org/10.1093/nar/gkae913
If you have any suggestions and questions, please contact jyjiang@link.cuhk.edu.hk