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Merge pull request #15 from jhudsl/cansavvy/stylefiles
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Run Styler on the R files
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@cansavvy
cansavvy authored Aug 26, 2021
2 parents bba0fc8 + 9bc4036 commit 08c4e8b
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Showing 10 changed files with 806 additions and 724 deletions.
149 changes: 80 additions & 69 deletions R/aaa_utils.R
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Original file line number Diff line number Diff line change
Expand Up @@ -2,28 +2,28 @@
# get script path and number of paragraphs
paragraph_from_script <- function(x) {
if (file.exists(x)) {
para = readLines(x, warn = FALSE)
para = trimws(para)
para = para[!para %in% c("", " ")]
para <- readLines(x, warn = FALSE)
para <- trimws(para)
para <- para[!para %in% c("", " ")]
return(para)
} else{
} else {
return(NA)
}
}

n_para = function(x) {
x = paragraph_from_script(x)
n_para <- function(x) {
x <- paragraph_from_script(x)
if (length(x) == 0) {
return(0)
}
ifelse(all(is.na(x)), NA, length(x))
}

length0 = function(x) {
length0 <- function(x) {
length(x) == 0
}

length0_to_NA = function(x) {
length0_to_NA <- function(x) {
if (length0(x)) {
x <- NA
}
Expand All @@ -38,38 +38,39 @@ length0_to_NA = function(x) {
#' @return A scalar character vector
#' @export
#' @rdname gs_helpers
gs_id_from_slide = function(file) {
gs_id_from_slide <- function(file) {
if (!file.exists(file)) {
return(NA_character_)
}
x = readLines(file, warn = FALSE)
ind = grep(x, pattern = "\\[(S|s)lides\\]")
x <- readLines(file, warn = FALSE)
ind <- grep(x, pattern = "\\[(S|s)lides\\]")
if (length(ind) > 0) {
x = x[ind]
x <- x[ind]
} else {
x = x[grep(x, pattern = ".*presentation/d/")]

x <- x[grep(x, pattern = ".*presentation/d/")]
}
if (!any(grepl("http", x))) {
return(NA_character_)
}
x = sub(".*\\(\\s*(http.*)\\s*\\).*", "\\1", x)
x = unlist(sapply(x, function(r) httr::parse_url(r)$path))
x = sub("/edit$", "", x)
x = sub("/export/.*", "", x)
x = basename(x)
x = stats::na.omit(x)
x = x[ nchar(x) > 5 ]
ux = unique(x)
x <- sub(".*\\(\\s*(http.*)\\s*\\).*", "\\1", x)
x <- unlist(sapply(x, function(r) httr::parse_url(r)$path))
x <- sub("/edit$", "", x)
x <- sub("/export/.*", "", x)
x <- basename(x)
x <- stats::na.omit(x)
x <- x[nchar(x) > 5]
ux <- unique(x)
if (length(ux) > 1) {
warning(paste0("Multiple sheets identified! Taking most frequent.",
" Please check ",
file))
x = sort(table(x), decreasing = TRUE)
x = names(x)[1]
warning(paste0(
"Multiple sheets identified! Taking most frequent.",
" Please check ",
file
))
x <- sort(table(x), decreasing = TRUE)
x <- names(x)[1]
# x = x[1]
} else {
x = ux
x <- ux
}
if (length(x) == 0 || grepl("\\(\\)", x)) {
return(NA_character_)
Expand All @@ -85,10 +86,10 @@ gs_id_from_slide = function(file) {
######################################
#' @export
#' @rdname gs_helpers
get_image_link_from_slide = function(file) {
x = readLines(file, warn = FALSE)
x = grep(x, pattern = "!\\[.*\\]\\(((resources/|)images.*)\\)", value = TRUE)
x = sub(x, pattern = "!\\[(.*)\\]\\(((resources/|)images.*)\\)", replacement = "\\1")
get_image_link_from_slide <- function(file) {
x <- readLines(file, warn = FALSE)
x <- grep(x, pattern = "!\\[.*\\]\\(((resources/|)images.*)\\)", value = TRUE)
x <- sub(x, pattern = "!\\[(.*)\\]\\(((resources/|)images.*)\\)", replacement = "\\1")
# if (length(x) == 0) {
# return(NA)
# }
Expand All @@ -101,61 +102,68 @@ get_image_link_from_slide = function(file) {
######################################
#' @export
#' @rdname gs_helpers
get_image_from_slide = function(file) {
x = readLines(file, warn = FALSE)
x = grep(x, pattern = "!\\[.*\\]\\(((resources/|)images.*)\\)", value = TRUE)
x = sub(x, pattern = "!\\[.*\\]\\(((resources/|)images.*)\\)", replacement = "\\1")
get_image_from_slide <- function(file) {
x <- readLines(file, warn = FALSE)
x <- grep(x, pattern = "!\\[.*\\]\\(((resources/|)images.*)\\)", value = TRUE)
x <- sub(x, pattern = "!\\[.*\\]\\(((resources/|)images.*)\\)", replacement = "\\1")
# if (length(x) == 0) {
# return(NA)
# }
return(x)
}


list_one_file = function(x, ending = "pdf") {
pdfs = list.files(
list_one_file <- function(x, ending = "pdf") {
pdfs <- list.files(
pattern = paste0("[.]", ending),
path = x,
full.names = TRUE)
full.names = TRUE
)
if (length(pdfs) > 1) {
warning(paste0(x, " had more than one ", ending, "! ",
"Only grabbing first"))
pdfs = pdfs[1]
warning(paste0(
x, " had more than one ", ending, "! ",
"Only grabbing first"
))
pdfs <- pdfs[1]
}
pdfs = length0_to_NA(pdfs)
pdfs <- length0_to_NA(pdfs)
return(pdfs)
}




png_pattern = function() {
paste0("^!\\[.+\\]\\((?!\\.png)\\)|",
"^!\\[\\]\\((?!\\.png)\\)|",
"^!\\[.+\\]\\((?!\\.png)\\)|",
"!\\[.+\\]\\(.+[^.png]\\)|",
"^!\\[.+\\]\\(https\\:\\/\\/www\\.youtu.+\\)")
png_pattern <- function() {
paste0(
"^!\\[.+\\]\\((?!\\.png)\\)|",
"^!\\[\\]\\((?!\\.png)\\)|",
"^!\\[.+\\]\\((?!\\.png)\\)|",
"!\\[.+\\]\\(.+[^.png]\\)|",
"^!\\[.+\\]\\(https\\:\\/\\/www\\.youtu.+\\)"
)
}

yt_pattern = function() {
paste0("^!\\[.+\\]\\(https\\:\\/\\/www\\.youtu.+\\)|",
"^!\\[.+\\]\\(https\\:\\/\\/youtu.+\\)")
yt_pattern <- function() {
paste0(
"^!\\[.+\\]\\(https\\:\\/\\/www\\.youtu.+\\)|",
"^!\\[.+\\]\\(https\\:\\/\\/youtu.+\\)"
)
}

is.Token = function(token) {
is.Token <- function(token) {
inherits(token, "Token") ||
(inherits(token, "request") &&
inherits(token$auth_token, "Token"))
inherits(token$auth_token, "Token"))
}


na_false = function(test) {
test[ is.na(test)] = FALSE
na_false <- function(test) {
test[is.na(test)] <- FALSE
test
}

na_true = function(test) {
test[ is.na(test)] = TRUE
na_true <- function(test) {
test[is.na(test)] <- TRUE
test
}

Expand All @@ -180,24 +188,27 @@ sys_type <- function() {
}


png_url = function(id, page_id) {
png_url <- function(id, page_id) {
paste0(
"https://docs.google.com/presentation/d/",
id, "/export/png?id=", id,
"&pageid=", page_id)
"&pageid=", page_id
)
}

download_png_urls = function(urls) {
res = vapply(urls, function(url) {
tfile = tempfile(fileext = ".png")
out = httr::GET(url, httr::write_disk(tfile),
httr::content_type(".png"))
download_png_urls <- function(urls) {
res <- vapply(urls, function(url) {
tfile <- tempfile(fileext = ".png")
out <- httr::GET(
url, httr::write_disk(tfile),
httr::content_type(".png")
)
httr::stop_for_status(out)
ctype = out$headers$`content-type`
ctype = strsplit(ctype, " ")[[1]]
ctype = sub(";$", "", ctype)
ctype <- out$headers$`content-type`
ctype <- strsplit(ctype, " ")[[1]]
ctype <- sub(";$", "", ctype)
if (any(ctype == "text/html") &&
!any(grepl("png", ctype))) {
!any(grepl("png", ctype))) {
stop("Output is not a PNG!")
}
tfile
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