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Week 11

Jasmine Dumas edited this page Aug 11, 2015 · 2 revisions

Here are my tasks for week 11:

Task: Configure the GEO-AWS application for deployment and submission to bioconductor as a standalone package (development stage); and for deployment to shinyapps.io or developing our own server to host the project on pending expected user usage.

Method: Test GEO-AWS with known data sets from GEO that will require pre-processing to ensure all features are functional. Write necessary documentation and vignettes to accompany the application. Utilize devtools and roxygen2 R packages for package development.


  • "Soft" pencils down date Monday, 17 August

  • "hard" pencils down date Friday, 21 August at 19:00 UTC. Final evaluations open at this point.

  • final evaluation by 28 August

August 11

  • This week is dedicated to fixing up the reproducible report and aceEditor code output for the KnitR output.

  • Next week's deadlines will include cleaning up the code for submission to Google Melange (inline code comments, making sure its works as intended, fixing up the README, the license etc)

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