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jamonterotena/README.md

🧬 My research focuses on plant genomics, specifically unraveling the genetic, genomic, or epigenomic features underlying recombination in Brassica napus. I employ advanced bioinformatics and computational biology techniques. A key aspect of my work involves managing large genomic datasets, writing code to detect crossovers in population genomic data, and developing machine learning models to predict the main features associated with recombination.

💻 I am passionate about bioinformatics and always eager to learn new methods to optimize my work. I have extensive experience with R and RMarkdown, and I regularly write scripts in Shell and Quarto.

🛤️ I enjoy sharing projects related to my research to support the scientific community, as well as sharing code and tips that have been helpful on my self-learning journey.

🗺️ Originally from Spain, I have worked as a Science teacher in England driven by my passion for education and I am currently completing my PhD in Germany. I speak Spanish, English and German fluently.

🐱 Click on this cat to access my resume!

Top Langs

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  1. GoliczGenomeLab/haploMAGIC GoliczGenomeLab/haploMAGIC Public

    Phasing, haplotype reconstruction and crossover detection with single-nucleotide polymorphism data from multiparental populations.

    R 3

  2. GoliczGenomeLab/haploRILs GoliczGenomeLab/haploRILs Public

    Founder haplotype reconstruction with SNP data

    R 1

  3. R-to-Quarto R-to-Quarto Public

    Fast conversion of R scripts to Quarto using a standard R format that makes the most of R chunks

    Shell

  4. Cartesian-table-from-command-line Cartesian-table-from-command-line Public

    Print table with all combinations of arguments provided by options on the command line

    R

  5. Rscript-template Rscript-template Public

    Standard Rscript with shebang, header, code sections (install packages, parse arguments and main code) and session info printout.

    R