Adding download mode to CI

jakobilab · Apr 22, 2024 · 1ccfa75 · 1ccfa75
1 parent bb954a3
commit 1ccfa75
Showing 1 changed file with 3 additions and 0 deletions.
diff --git a/.github/workflows/run_circhemy_ci.yml b/.github/workflows/run_circhemy_ci.yml
@@ -40,6 +40,9 @@ jobs:
       run: |
          circhemy --version
          which circhemy
+    - name: Download circhemy database
+      run: |
+         circhemy download
     - name: Running circhemy convert test
       run: |
          cat `python3 -c "import site; print(site.getsitepackages()[0])"`/circhemy/data/circhemy_query.results | circhemy convert  -q STDIN -i circBase -o CircAtlas2 circBase Genome > convert_output