Update R-CMD-check.yaml #35
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| on: | |
| push: | |
| branches: | |
| - master | |
| pull_request: | |
| branches: | |
| - master | |
| name: R-CMD-check | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: windows-latest, r: '3.6'} | |
| - {os: windows-latest, r: '4.3'} | |
| - {os: windows-latest, r: 'devel'} | |
| - {os: macOS-latest, r: '3.6'} | |
| - {os: macOS-latest, r: '4.3'} | |
| - {os: macOS-latest, r: 'devel'} | |
| - {os: ubuntu-22.04, r: '3.6', rspm: "https://demo.rstudiopm.com/all/__linux__/jammy/latest"} | |
| - {os: ubuntu-22.04, r: '4.3', rspm: "https://demo.rstudiopm.com/all/__linux__/jammy/latest"} | |
| env: | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
| RSPM: ${{ matrix.config.rspm }} | |
| TZ: UTC | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - name: Checkout Repository | |
| uses: actions/checkout@v3 | |
| - name: Setup R from r-lib | |
| if: runner.os != 'ubuntu-22.04' | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| http-user-agent: ${{ matrix.config.http-user-agent }} | |
| - name: Setup pandoc from r-lib | |
| if: runner.os != 'ubuntu-22.04' | |
| uses: r-lib/actions/setup-pandoc@v2 | |
| - name: Install R packages for CI | |
| run: | | |
| install.packages('remotes') | |
| remotes::install_github('r-hub/sysreqs') | |
| shell: Rscript {0} | |
| - name: Query dependencies | |
| run: | | |
| install.packages('remotes') | |
| saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) | |
| shell: Rscript {0} | |
| - name: Restore R package cache | |
| if: "!contains(github.event.head_commit.message, '/nocache') && runner.os != 'ubuntu-22.04'" | |
| uses: actions/cache@v3 | |
| with: | |
| path: ${{ env.R_LIBS_USER }} | |
| key: ${{ env.cache-version }}-${{ runner.os }}-r-${{ matrix.config.r }}-${{ hashFiles('.github/depends.Rds') }} | |
| restore-keys: ${{ env.cache-version }}-${{ runner.os }}-r-${{ matrix.config.r }}- | |
| - name: Cache R packages on Linux | |
| if: "!contains(github.event.head_commit.message, '/nocache') && runner.os == 'ubuntu-22.04' " | |
| uses: actions/cache@v3 | |
| with: | |
| path: /home/runner/work/_temp/Library | |
| key: ${{ env.cache-version }}-${{ runner.os }}-r-${{ matrix.config.r }}-${{ hashFiles('.github/depends.Rds') }} | |
| restore-keys: ${{ env.cache-version }}-${{ runner.os }}-r-${{ matrix.config.r }}- | |
| - name: Install system dependencies | |
| if: runner.os == 'ubuntu-22.04' | |
| env: | |
| RHUB_PLATFORM: linux-x86_64-ubuntu-gcc | |
| run: | | |
| sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))") | |
| sudo -s eval "$sysreqs" | |
| - name: Install R dependencies | |
| run: | | |
| remotes::install_deps(dependencies = TRUE) | |
| remotes::install_cran("rcmdcheck") | |
| remotes::install_cran("covr") | |
| shell: Rscript {0} | |
| - name: Session info | |
| run: | | |
| options(width = 100) | |
| pkgs <- installed.packages()[, "Package"] | |
| sessioninfo::session_info(pkgs, include_base = TRUE) | |
| shell: Rscript {0} | |
| - name: Run CMD check | |
| env: | |
| _R_CHECK_CRAN_INCOMING_: false | |
| DISPLAY: 99.0 | |
| run: | | |
| options(crayon.enabled = TRUE) | |
| rcmdcheck::rcmdcheck(args = "--no-manual", error_on = "warning", check_dir = "check") | |
| shell: Rscript {0} | |
| - name: Reveal testthat details | |
| if: env.has_testthat == 'true' | |
| run: find . -name testthat.Rout -exec cat '{}' ';' | |
| - name: Test coverage | |
| if: github.ref == 'refs/heads/master' && env.run_covr == 'true' && runner.os == 'ubuntu-22.04' | |
| run: | | |
| covr::codecov(coverage = covr::package_coverage(type = "all")) | |
| shell: Rscript {0} | |
| - name: Upload check results | |
| if: failure() | |
| uses: actions/upload-artifact@master | |
| with: | |
| name: ${{ runner.os }}-r${{ matrix.config.r }}-results | |
| path: check | |
| - name: Install package | |
| run: | | |
| R CMD INSTALL . | |
| git config --global user.name ${{secrets.GH_USER}} | |
| git config --global user.email ${{secrets.GH_EMAIL}} | |
| - name: Deploy Pkgdown to branch | |
| run: pkgdown::deploy_to_branch(new_process = FALSE) | |
| shell: Rscript {0} |