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  1. decombinator decombinator Public

    Decombinator v5: fast, error-correcting analysis of TCR repertoires

    Python 22 8

  2. ExpandedBenchmark ExpandedBenchmark Public

    6 2

  3. Decombinator_v2 Decombinator_v2 Public

    Forked from uclinfectionimmunity/Decombinator

    Fast, efficient tool for analysis of T cell receptor repertoires

    Python 1

  4. LeoTask LeoTask Public

    Forked from mleoking/LeoTask

    A lightweight parallel task running and results aggregation (MapReduce) framework

    Java 1

  5. LeoTaskApp LeoTaskApp Public

    Forked from mleoking/LeoTaskApp

    Applications based on the LeoTask framework http://github.com/mleoking/LeoTask.

    Java 1

  6. Single-Tag-Decombinator Single-Tag-Decombinator Public

    Modified Version of Decombinator to Allow Single Tag Search for Short Read Data

    Python 1 1

Repositories

Showing 10 of 23 repositories
  • decombinator Public

    Decombinator v5: fast, error-correcting analysis of TCR repertoires

    innate2adaptive/decombinator’s past year of commit activity
    Python 22 MIT 8 5 0 Updated Dec 2, 2024
  • Decombinator-Tools Public

    Useful scripts for working with Decombinator

    innate2adaptive/Decombinator-Tools’s past year of commit activity
    Python 0 0 0 0 Updated Nov 15, 2024
  • sceptr Public Forked from yutanagano/sceptr

    Simple Contrastive Embedding of the Primary sequence of T cell Receptors

    innate2adaptive/sceptr’s past year of commit activity
    Python 0 MIT 2 0 0 Updated Oct 7, 2024
  • TCR-Cancer-Prediction Public Forked from RcwYuen/TCR-Cancer-Prediction

    Rudy Yuen's MSc project 2024

    innate2adaptive/TCR-Cancer-Prediction’s past year of commit activity
    Jupyter Notebook 0 MIT 1 0 0 Updated Apr 18, 2024
  • Decombinator-Test-Data Public Forked from JamieHeather/Decombinator-Test-Data

    Sample TCR FASTQ data for testing the Decombinator pipeline

    innate2adaptive/Decombinator-Test-Data’s past year of commit activity
    Shell 0 2 1 0 Updated Mar 25, 2024
  • CovidsortiumTCRExpanded Public

    Scripts that produce data and figures for the COVIDsortium TCR paper (Aug 2022)

    innate2adaptive/CovidsortiumTCRExpanded’s past year of commit activity
    R 0 0 0 0 Updated Aug 4, 2023
  • Bulk-RNAseq-analysis Public

    Repo with scripts used for bulk RNAseq analysis in the Noursadeghi's lab

    innate2adaptive/Bulk-RNAseq-analysis’s past year of commit activity
    R 0 0 0 0 Updated Dec 22, 2022
  • ExpandedBenchmark Public
    innate2adaptive/ExpandedBenchmark’s past year of commit activity
    6 2 0 0 Updated Jul 1, 2021
  • Modeller-Repair Public
    innate2adaptive/Modeller-Repair’s past year of commit activity
    Python 0 0 0 0 Updated Jun 29, 2021
  • Single-Tag-Decombinator Public

    Modified Version of Decombinator to Allow Single Tag Search for Short Read Data

    innate2adaptive/Single-Tag-Decombinator’s past year of commit activity
    Python 1 1 0 0 Updated Jul 27, 2020
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