Skip to content

Python script takes text file as input and outputs a heatmap image

Notifications You must be signed in to change notification settings

inkiyad/TIL-Detector-txt2heatmap

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

14 Commits
 
 
 
 
 
 
 
 
 
 

Repository files navigation

TIL-Detector-txt2heatmap

The script works with the txt output of an heatmap generated by u24-lymphocyte Convolutional Neural Network. The model has been trained by TCGA database.

Setup

  • Place text file in Data/Unsorted/
  • Run Txt2HeatMap.py from the scripts directory

Figure

TCGA Database: TCGA-YA-A8S7-01Z-00-DX1 {Liver Tumor Biopsy} Predicted lymphocyte heatmap on top of raw image

About

Python script takes text file as input and outputs a heatmap image

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages