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@inab

Spanish National Bioinformatics Institute

Alfonso Valencia | BSC, ICREA, INB Director - Salvador Capella-Gutierrez | BSC, INB CTO

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  1. trimal trimal Public

    A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0

    C++ 202 47

  2. BIOLITMAP BIOLITMAP Public

    Code for the paper "BIOLITMAP: a web-based geolocated and temporal visualization of the evolution of bioinformatics publications" in Oxford Bioinformatics.

    Python 20 3

  3. WfExS-backend WfExS-backend Public

    Workflow Execution Service Backend

    Python 18 6

  4. openVRE openVRE Public

    Open Virtual Research Environment

    JavaScript 9 3

  5. SmartRNASeqCaller SmartRNASeqCaller Public

    SmartRNASeqCaller is a post-processing pipeline to improve germline variant calling from RNA-Seq data

    Python 7 3

  6. rd-connect-cas-overlay rd-connect-cas-overlay Public archive

    Forked from UniconLabs/simple-cas4-overlay-template

    RD-Connect CAS overlay

    Shell 6 2

Repositories

Showing 10 of 202 repositories
  • docker-tes-proxy Public

    A docker shim which submits commands to a GA4GH TES service

    Python 0 Apache-2.0 0 0 0 Updated Apr 9, 2025
  • openEBench-nuxt-v3 Public

    OpenEBench Micro Frontends. Nuxt 3 version

    Vue 0 Apache-2.0 0 13 1 Updated Apr 8, 2025
  • trimal Public

    A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0

    C++ 202 GPL-3.0 47 34 1 Updated Apr 8, 2025
  • WfExS-backend Public

    Workflow Execution Service Backend

    Python 18 Apache-2.0 6 24 1 Updated Apr 7, 2025
  • oeb-visualizations Public

    Library of data visualizations for OpenEBench

    HTML 0 MIT 0 2 7 Updated Apr 3, 2025
  • InSoLiTo Public Forked from SergiAguilo/InSoLiTo

    Inferring Social Life of Tools (InSoLiTo) is an OpenEBench project that provide guidance on scientific tools worth benchmarking

    Python 2 MIT 2 15 7 Updated Apr 3, 2025
  • openVRE-core-dev Public

    Open Virtual Research Environment development version

    JavaScript 0 0 0 1 Updated Apr 2, 2025
  • oeb-widgets-graphs Public

    Graph widgets for OEB applications

    JavaScript 0 Apache-2.0 0 0 0 Updated Mar 28, 2025
  • scipion-dockerfile Public

    Dockerfile for Scipion (focused on ELIXIR STEERS)

    Dockerfile 1 Apache-2.0 0 0 0 Updated Mar 25, 2025
  • benchmark-webservice-refdataset-fetch-issue Public Forked from qfo/benchmark-webservice

    This repository contains the codebase that runs the webservice to benchmark orthology predictions on a common reference proteome dataset.

    Python 0 9 0 0 Updated Mar 21, 2025
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