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RF: Move sigpy to an extra optional dependency #123

RF: Move sigpy to an extra optional dependency

RF: Move sigpy to an extra optional dependency #123

Workflow file for this run

name: Run code tests on push and pull requests
on:
push:
pull_request:
# Allows you to run this workflow manually from the Actions tab
workflow_dispatch:
jobs:
tests:
name: Code tests (Python ${{ matrix.python-version }}, ${{ matrix.os }})
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: ["ubuntu-latest"]
python-version: ["3.8", "3.9", "3.10", "3.11"]
steps:
- uses: actions/checkout@v4
with:
submodules: true
lfs: true
- uses: conda-incubator/setup-miniconda@v2
with:
auto-update-conda: true
python-version: ${{ matrix.python-version }}
activate-environment: test
environment-file: .github/requirements.yml
auto-activate-base: false
channels: conda-forge
- shell: bash -l {0}
run: |
conda info
conda list
# - name: Lint
# shell: bash -l {0}
# run: |
# python -m flake8 pypulseq
- name: Run pytest
shell: bash -l {0}
run: |
pip install .
pytest -m "not matlab_seq_comp and not sigpy" pypulseq/tests
- name: Run pytest[sigpy]
shell: bash -l {0}
run: |
pip install .[sigpy]
pytest -m "not matlab_seq_comp" pypulseq/tests
continue-on-error: true