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coerce dtypes to objects #3

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Aug 1, 2023
Merged

coerce dtypes to objects #3

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6 changes: 6 additions & 0 deletions src/onemod/models/swimr_model.py
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Original file line number Diff line number Diff line change
Expand Up @@ -169,6 +169,12 @@ def swimr_model(experiment_dir: Union[Path, str], submodel_id: str) -> None:
df_pred["holdout_id"] = holdout_id
df_pred["location_id"] = pd.to_numeric(df_pred["location_id"])
df_pred["sex_id"] = df_input["sex_id"].unique()[0]

# Since we are merging on columns specified in the col_id list, ensure they are the correct
# datatypes.
for id_col in settings["col_id"]:
df_pred[id_col] = df_pred[id_col].astype(df_input[id_col].dtype)

df_pred = df_pred.merge(
right=df_input[as_list(settings["col_id"]) + ["test", settings["col_pred"]]],
on=settings["col_id"],
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