wg_WGBYC

Working Group on Bycatch of Protected Species

The repository is organized by year.

Access to WGBYC data

The WGBYC data format is here http://datsu.ices.dk/web/selRep.aspx?Dataset=128.

First ask ICES to get the right to access WGBYC data using the API.

Then, in R, use this :

#tokenize data exchange
library(icesConnect) 
#ask a token using  ices_token
ices_token(username="yourusername",password="youpassword",refresh=T)
# read the data from ices API
library(httr)
library(jsonlite)
linkD1<-"https://bycatch.ices.dk/api/GetD1_Fishing_effort"
linkD2<-"https://bycatch.ices.dk/api/GetD2_Bycatch_monitoring_effort"
linkD3<-"https://bycatch.ices.dk/api/GetD3_BycatchEvent"
linkD4<-"https://bycatch.ices.dk/api/GetOverviewSubmissionTable/2023"
linkD5<-"https://bycatch.ices.dk/api/GetByCatchRoadMapListSpecies"
# download and parse the data
resp1<-ices_get_jwt(linkD1,username="yourusername")
D1<-content(resp1,as="text")
D1<-fromJSON(D1)
resp2<-ices_get_jwt(linkD2,username="yourusername")
D2<-content(resp2,as="text")
D2<-fromJSON(D2)
resp3<-ices_get_jwt(linkD3,username="yourusername")  
D3<-content(resp3,as="text")
D3<-fromJSON(D3)
resp4<-ices_get_jwt(linkD4,username="yourusername")  
D4<-content(resp4,as="text")
D4<-fromJSON(D4)
resp5<-ices_get_jwt(linkD5,username="yourusername")  
D5<-content(resp5,as="text")
D5<-fromJSON(D5)