BioChatter MeTTa

This repo contains an implementation of Natural Language Prompt to MeTTa Query conversion.
Note: This implementation only works in a linux environment.

• To run the examples, follow the steps below :

1. Install required dependencies

   pip install -r requirements.txt

2. Create .env file and add required environment variable

   touch .env && \
   echo OPENAI_API_KEY="<your_api_key>" > .env

3. Run main.py

   python3 main.py

Repository structure:

• bioatomspace_data_subset/ : Contains the sample MeTTa files from the Human BioAtomspace.
• biochatter/ : Contains the BioChatter package for converting NL prompts to MeTTa queries.
• biocypher_config/ : Contains the BioCypher schema configuration files.
• main.py : This is the main module that imports the BioChatter package.