Merge pull request #42 from hubverse-org/to-hubverse

Change org name
hubverse-org · Jun 19, 2024 · 97df47f · 97df47f
2 parents 3d8853d + c98ddff
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diff --git a/.github/CONTRIBUTING.md b/.github/CONTRIBUTING.md
@@ -18,7 +18,7 @@ Our procedures for contributing bigger changes, code in particular, generally fo
 
 ### Pull request process
 
-*   Fork the package and clone onto your computer. If you haven't done this before, we recommend using `usethis::create_from_github("Infectious-Disease-Modeling-Hubs/hubData", fork = TRUE)`.
+*   Fork the package and clone onto your computer. If you haven't done this before, we recommend using `usethis::create_from_github("hubverse-org/hubData", fork = TRUE)`.
 
 *   Install all development dependencies with `devtools::install_dev_deps()`, and then make sure the package passes R CMD check by running `devtools::check()`. 
     If R CMD check doesn't pass cleanly, it's a good idea to ask for help before continuing. 

diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,5 +1,5 @@
 Package: hubData
-Title: Tools for accessing and working with hubverse Hub data
+Title: Tools for accessing and working with hubverse data
 Version: 0.2.0
 Authors@R: 
     c(person("Anna", "Krystalli", , "annakrystalli@googlemail.com", role = c("aut", "cre"),
@@ -17,8 +17,8 @@ Encoding: UTF-8
 Roxygen: list(markdown = TRUE)
 RoxygenNote: 7.3.1
 Config/testthat/edition: 3
-URL: https://github.com/Infectious-Disease-Modeling-Hubs/hubData
-BugReports: https://github.com/Infectious-Disease-Modeling-Hubs/hubData/issues
+URL: https://github.com/hubverse-org/hubData
+BugReports: https://github.com/hubverse-org/hubData/issues
 Imports: 
     arrow (>= 12.0.0),
     checkmate,
@@ -44,9 +44,9 @@ Suggests:
     rmarkdown,
     testthat (>= 3.2.0)
 Remotes:
-    Infectious-Disease-Modeling-Hubs/hubUtils@enhancement/v3-utils,
+    hubverse-org/hubUtils@enhancement/v3-utils,
     apache/arrow/r@apache-arrow-15.0.2
-Config/Needs/website: Infectious-Disease-Modeling-Hubs/hubStyle
+Config/Needs/website: hubverse-org/hubStyle
 Depends: 
     R (>= 2.10)
 VignetteBuilder: knitr
diff --git a/NEWS.md b/NEWS.md
@@ -10,4 +10,4 @@
 
 # hubData 0.0.1
 
-* Initial package release resulting from split of `hubUtils` package. See [`hubUtils` NEWS.md](https://github.com/Infectious-Disease-Modeling-Hubs/hubUtils/blob/main/NEWS.md) for details including previous release notes.
+* Initial package release resulting from split of `hubUtils` package. See [`hubUtils` NEWS.md](https://github.com/hubverse-org/hubUtils/blob/main/NEWS.md) for details including previous release notes.
diff --git a/README.Rmd b/README.Rmd
@@ -14,12 +14,12 @@ knitr::opts_chunk$set(
 ```
 
 
-# hubData <a href="https://Infectious-Disease-Modeling-Hubs.github.io/hubData/"><img src="man/figures/logo.png" align="right" height="131" alt="hubData website" /></a>
+# hubData <a href="https://hubverse-org.github.io/hubData/"><img src="man/figures/logo.png" align="right" height="131" alt="hubData website" /></a>
 
 <!-- badges: start -->
 [![Lifecycle: experimental](https://img.shields.io/badge/lifecycle-experimental-orange.svg)](https://lifecycle.r-lib.org/articles/stages.html#experimental)
 [![CRAN status](https://www.r-pkg.org/badges/version/hubData)](https://CRAN.R-project.org/package=hubData)
-[![R-CMD-check](https://github.com/Infectious-Disease-Modeling-Hubs/hubData/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/Infectious-Disease-Modeling-Hubs/hubData/actions/workflows/R-CMD-check.yaml)
+[![R-CMD-check](https://github.com/hubverse-org/hubData/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/hubverse-org/hubData/actions/workflows/R-CMD-check.yaml)
 <!-- badges: end -->
 
 The goal of hubData is to provide tools for accessing and working with hubverse Hub data. 
@@ -32,7 +32,7 @@ You can install the development version of hubData from [GitHub](https://github.
 
 ``` r
 # install.packages("remotes")
-remotes::install_github("Infectious-Disease-Modeling-Hubs/hubData")
+remotes::install_github("hubverse-org/hubData")
 ```
 
 > ##### 💡 TIP 

diff --git a/README.md b/README.md
@@ -1,15 +1,15 @@
 
 <!-- README.md is generated from README.Rmd. Please edit that file -->
 
-# hubData <a href="https://Infectious-Disease-Modeling-Hubs.github.io/hubData/"><img src="man/figures/logo.png" align="right" height="131" alt="hubData website" /></a>
+# hubData <a href="https://hubverse-org.github.io/hubData/"><img src="man/figures/logo.png" align="right" height="131" alt="hubData website" /></a>
 
 <!-- badges: start -->
 
 [![Lifecycle:
 experimental](https://img.shields.io/badge/lifecycle-experimental-orange.svg)](https://lifecycle.r-lib.org/articles/stages.html#experimental)
 [![CRAN
 status](https://www.r-pkg.org/badges/version/hubData)](https://CRAN.R-project.org/package=hubData)
-[![R-CMD-check](https://github.com/Infectious-Disease-Modeling-Hubs/hubData/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/Infectious-Disease-Modeling-Hubs/hubData/actions/workflows/R-CMD-check.yaml)
+[![R-CMD-check](https://github.com/hubverse-org/hubData/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/hubverse-org/hubData/actions/workflows/R-CMD-check.yaml)
 <!-- badges: end -->
 
 The goal of hubData is to provide tools for accessing and working with
@@ -27,7 +27,7 @@ You can install the development version of hubData from
 
 ``` r
 # install.packages("remotes")
-remotes::install_github("Infectious-Disease-Modeling-Hubs/hubData")
+remotes::install_github("hubverse-org/hubData")
 ```
 
 > ##### 💡 TIP

diff --git a/_pkgdown.yml b/_pkgdown.yml
@@ -1,3 +1,3 @@
-url: https://infectious-disease-modeling-hubs.github.io/hubData/
+url: https://hubverse-org.github.io/hubData/
 template:
   package: hubStyle
diff --git a/inst/config/tasks-comp-tid.json b/inst/config/tasks-comp-tid.json
@@ -1,5 +1,5 @@
 {
-    "schema_version": "https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/main/v3.0.0/tasks-schema.json",
+    "schema_version": "https://raw.githubusercontent.com/hubverse-org/schemas/main/v3.0.0/tasks-schema.json",
     "rounds": [{
             "round_id_from_variable": true,
             "round_id": "forecast_date",

diff --git a/inst/config/tasks.json b/inst/config/tasks.json
@@ -1,5 +1,5 @@
 {
-    "schema_version": "https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/main/v3.0.0/tasks-schema.json",
+    "schema_version": "https://raw.githubusercontent.com/hubverse-org/schemas/main/v3.0.0/tasks-schema.json",
     "rounds": [{
             "round_id_from_variable": true,
             "round_id": "forecast_date",

diff --git a/tests/_snaps/hub-connection.md b/tests/_snaps/hub-connection.md
@@ -32,13 +32,13 @@
        - attr(*, "hub_path")= chr "test/hub_path"
        - attr(*, "model_output_dir")= chr "test/model_output_dir"
        - attr(*, "config_admin")=List of 8
-        ..$ schema_version: chr "https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/main/v2.0.0/admin-schema.json"
+        ..$ schema_version: chr "https://raw.githubusercontent.com/hubverse-org/schemas/main/v2.0.0/admin-schema.json"
         ..$ name          : chr "Simple Forecast Hub"
         ..$ maintainer    : chr "Consortium of Infectious Disease Modeling Hubs"
         ..$ contact       :List of 2
         .. ..$ name : chr "Joe Bloggs"
         .. ..$ email: chr "j.bloggs@cidmh.com"
-        ..$ repository_url: chr "https://github.com/Infectious-Disease-Modeling-Hubs/example-simple-forecast-hub"
+        ..$ repository_url: chr "https://github.com/hubverse-org/example-simple-forecast-hub"
         ..$ hub_models    :List of 1
         .. ..$ :List of 3
         .. .. ..$ team_abbr : chr "simple_hub"
@@ -47,7 +47,7 @@
         ..$ file_format   : chr [1:3] "csv" "parquet" "arrow"
         ..$ timezone      : chr "US/Eastern"
        - attr(*, "config_tasks")=List of 2
-        ..$ schema_version: chr "https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/main/v2.0.0/tasks-schema.json"
+        ..$ schema_version: chr "https://raw.githubusercontent.com/hubverse-org/schemas/main/v2.0.0/tasks-schema.json"
         ..$ rounds        :List of 2
         .. ..$ :List of 4
         .. .. ..$ round_id_from_variable: logi TRUE
@@ -184,13 +184,13 @@
        - attr(*, "hub_path")= chr "test/hub_path"
        - attr(*, "model_output_dir")= chr "test/model_output_dir"
        - attr(*, "config_admin")=List of 8
-        ..$ schema_version: chr "https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/main/v2.0.0/admin-schema.json"
+        ..$ schema_version: chr "https://raw.githubusercontent.com/hubverse-org/schemas/main/v2.0.0/admin-schema.json"
         ..$ name          : chr "Simple Forecast Hub"
         ..$ maintainer    : chr "Consortium of Infectious Disease Modeling Hubs"
         ..$ contact       :List of 2
         .. ..$ name : chr "Joe Bloggs"
         .. ..$ email: chr "j.bloggs@cidmh.com"
-        ..$ repository_url: chr "https://github.com/Infectious-Disease-Modeling-Hubs/example-simple-forecast-hub"
+        ..$ repository_url: chr "https://github.com/hubverse-org/example-simple-forecast-hub"
         ..$ hub_models    :List of 1
         .. ..$ :List of 3
         .. .. ..$ team_abbr : chr "simple_hub"
@@ -199,7 +199,7 @@
         ..$ file_format   : chr [1:3] "csv" "parquet" "arrow"
         ..$ timezone      : chr "US/Eastern"
        - attr(*, "config_tasks")=List of 2
-        ..$ schema_version: chr "https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/main/v2.0.0/tasks-schema.json"
+        ..$ schema_version: chr "https://raw.githubusercontent.com/hubverse-org/schemas/main/v2.0.0/tasks-schema.json"
         ..$ rounds        :List of 2
         .. ..$ :List of 4
         .. .. ..$ round_id_from_variable: logi TRUE
@@ -363,7 +363,7 @@
        - attr(*, "hub_path")= chr "flusight"
        - attr(*, "model_output_dir")= chr "forecasts"
        - attr(*, "config_admin")=List of 9
-        ..$ schema_version  : chr "https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/main/v2.0.0/admin-schema.json"
+        ..$ schema_version  : chr "https://raw.githubusercontent.com/hubverse-org/schemas/main/v2.0.0/admin-schema.json"
         ..$ name            : chr "US CDC FluSight"
         ..$ maintainer      : chr "US CDC"
         ..$ contact         :List of 2
@@ -375,7 +375,7 @@
         ..$ timezone        : chr "US/Eastern"
         ..$ model_output_dir: chr "forecasts"
        - attr(*, "config_tasks")=List of 2
-        ..$ schema_version: chr "https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/main/v2.0.0/tasks-schema.json"
+        ..$ schema_version: chr "https://raw.githubusercontent.com/hubverse-org/schemas/main/v2.0.0/tasks-schema.json"
         ..$ rounds        :List of 1
         .. ..$ :List of 4
         .. .. ..$ round_id_from_variable: logi TRUE
@@ -509,7 +509,7 @@
        - attr(*, "hub_path")= chr "test/hub_path"
        - attr(*, "model_output_dir")= chr "test/model_output_dir"
        - attr(*, "config_admin")=List of 9
-        ..$ schema_version  : chr "https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/main/v2.0.0/admin-schema.json"
+        ..$ schema_version  : chr "https://raw.githubusercontent.com/hubverse-org/schemas/main/v2.0.0/admin-schema.json"
         ..$ name            : chr "US CDC FluSight"
         ..$ maintainer      : chr "US CDC"
         ..$ contact         :List of 2
@@ -521,7 +521,7 @@
         ..$ timezone        : chr "US/Eastern"
         ..$ model_output_dir: chr "forecasts"
        - attr(*, "config_tasks")=List of 2
-        ..$ schema_version: chr "https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/main/v2.0.0/tasks-schema.json"
+        ..$ schema_version: chr "https://raw.githubusercontent.com/hubverse-org/schemas/main/v2.0.0/tasks-schema.json"
         ..$ rounds        :List of 1
         .. ..$ :List of 4
         .. .. ..$ round_id_from_variable: logi TRUE
@@ -799,13 +799,13 @@
        - attr(*, "hub_path")= chr "test/hub_path"
        - attr(*, "model_output_dir")= chr "test/model_output_dir"
        - attr(*, "config_admin")=List of 8
-        ..$ schema_version: chr "https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/main/v2.0.0/admin-schema.json"
+        ..$ schema_version: chr "https://raw.githubusercontent.com/hubverse-org/schemas/main/v2.0.0/admin-schema.json"
         ..$ name          : chr "Simple Forecast Hub"
         ..$ maintainer    : chr "Consortium of Infectious Disease Modeling Hubs"
         ..$ contact       :List of 2
         .. ..$ name : chr "Joe Bloggs"
         .. ..$ email: chr "j.bloggs@cidmh.com"
-        ..$ repository_url: chr "https://github.com/Infectious-Disease-Modeling-Hubs/example-simple-forecast-hub"
+        ..$ repository_url: chr "https://github.com/hubverse-org/example-simple-forecast-hub"
         ..$ hub_models    :List of 1
         .. ..$ :List of 3
         .. .. ..$ team_abbr : chr "simple_hub"
@@ -814,7 +814,7 @@
         ..$ file_format   : chr [1:3] "csv" "parquet" "arrow"
         ..$ timezone      : chr "US/Eastern"
        - attr(*, "config_tasks")=List of 2
-        ..$ schema_version: chr "https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/main/v2.0.0/tasks-schema.json"
+        ..$ schema_version: chr "https://raw.githubusercontent.com/hubverse-org/schemas/main/v2.0.0/tasks-schema.json"
         ..$ rounds        :List of 2
         .. ..$ :List of 4
         .. .. ..$ round_id_from_variable: logi TRUE
@@ -1022,13 +1022,13 @@
        - attr(*, "hub_path")= chr "test/hub_path"
        - attr(*, "model_output_dir")= chr "test/model_output_dir"
        - attr(*, "config_admin")=List of 8
-        ..$ schema_version: chr "https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/main/v2.0.0/admin-schema.json"
+        ..$ schema_version: chr "https://raw.githubusercontent.com/hubverse-org/schemas/main/v2.0.0/admin-schema.json"
         ..$ name          : chr "Simple Forecast Hub"
         ..$ maintainer    : chr "Consortium of Infectious Disease Modeling Hubs"
         ..$ contact       :List of 2
         .. ..$ name : chr "Joe Bloggs"
         .. ..$ email: chr "j.bloggs@cidmh.com"
-        ..$ repository_url: chr "https://github.com/Infectious-Disease-Modeling-Hubs/example-simple-forecast-hub"
+        ..$ repository_url: chr "https://github.com/hubverse-org/example-simple-forecast-hub"
         ..$ hub_models    :List of 1
         .. ..$ :List of 3
         .. .. ..$ team_abbr : chr "simple_hub"
@@ -1037,7 +1037,7 @@
         ..$ file_format   : chr [1:3] "csv" "parquet" "arrow"
         ..$ timezone      : chr "US/Eastern"
        - attr(*, "config_tasks")=List of 2
-        ..$ schema_version: chr "https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/main/v2.0.0/tasks-schema.json"
+        ..$ schema_version: chr "https://raw.githubusercontent.com/hubverse-org/schemas/main/v2.0.0/tasks-schema.json"
         ..$ rounds        :List of 2
         .. ..$ :List of 4
         .. .. ..$ round_id_from_variable: logi TRUE
Original file line number	Diff line number	Diff line change
Expand Up		@@ -10,4 +10,4 @@

		# hubData 0.0.1

		* Initial package release resulting from split of `hubUtils` package. See [`hubUtils` NEWS.md](https://github.com/Infectious-Disease-Modeling-Hubs/hubUtils/blob/main/NEWS.md) for details including previous release notes.
		* Initial package release resulting from split of `hubUtils` package. See [`hubUtils` NEWS.md](https://github.com/hubverse-org/hubUtils/blob/main/NEWS.md) for details including previous release notes.