H-3316: Flatten apps/hash-graph workspace hierarchy

[TimDiekmann]

🌟 What is the purpose of this PR?

turbo does not properly detect dependencies and it turned out this is because of nested workspaces. This PR re-organizes the apps/hash-graph folder to remove the workspace nesting.

🔍 What does this change?

• Move Postgres-migrations to graph crate
• Move OpenAPI generation to api-crate
• Move status type definitions to own crate type-defs
• Move http-tests to tests/ folder
• Rename apps/hash-graph/bins/cli to @apps/hash-graph
• Allow package name to be set in sync-turborepo script

Pre-Merge Checklist 🚀

🚢 Has this modified a publishable library?

This PR:

• does not modify any publishable blocks or libraries, or modifications do not need publishing

📜 Does this require a change to the docs?

The changes in this PR:

• are internal and do not require a docs change

🕸️ Does this require a change to the Turbo Graph?

The changes in this PR:

• affected the execution graph, and the turbo.json's have been updated to reflect this

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[codecov]

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 17.84%. Comparing base (b266275) to head (dfb8108).
Report is 126 commits behind head on main.

Additional details and impacted files

@@            Coverage Diff             @@
##             main    #5033      +/-   ##
==========================================
+ Coverage   17.79%   17.84%   +0.05%     
==========================================
  Files         506      506              
  Lines       16569    16569              
  Branches     2546     2546              
==========================================
+ Hits         2948     2957       +9     
  Misses      13600    13600              
+ Partials       21       12       -9     

Flag	Coverage Δ
apps.hash-ai-worker-ts	1.58% <ø> (ø)
apps.hash-api	1.18% <ø> (ø)
blockprotocol.type-system	55.38% <ø> (+6.92%)	⬆️
local.hash-backend-utils	9.38% <ø> (ø)
local.hash-isomorphic-utils	1.06% <ø> (ø)
local.hash-subgraph	25.22% <ø> (ø)
rust.deer	5.88% <ø> (ø)
rust.error-stack	72.68% <ø> (ø)
rust.sarif	87.83% <ø> (ø)

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[github-actions]

Benchmark results

@rust/graph-benches – Integrations

scaling_read_entity_complete_one_depth

Function	Value	Mean	Flame graphs
entity_by_id	10 entities	$$51.6 \mathrm{ms} \pm 230 \mathrm{μs}\left({\color{gray}0.135 \mathrm{\%}}\right) $$	Flame Graph
entity_by_id	50 entities	$$1.55 \mathrm{s} \pm 3.20 \mathrm{ms}\left({\color{red}290 \mathrm{\%}}\right) $$	Flame Graph
entity_by_id	1 entities	$$19.8 \mathrm{ms} \pm 75.0 \mathrm{μs}\left({\color{gray}-0.505 \mathrm{\%}}\right) $$	Flame Graph
entity_by_id	25 entities	$$70.2 \mathrm{ms} \pm 343 \mathrm{μs}\left({\color{gray}-4.146 \mathrm{\%}}\right) $$	Flame Graph
entity_by_id	5 entities	$$25.4 \mathrm{ms} \pm 267 \mathrm{μs}\left({\color{gray}1.55 \mathrm{\%}}\right) $$	Flame Graph

scaling_read_entity_complete_zero_depth

Function	Value	Mean	Flame graphs
entity_by_id	10 entities	$$2.04 \mathrm{ms} \pm 9.63 \mathrm{μs}\left({\color{gray}-0.878 \mathrm{\%}}\right) $$	Flame Graph
entity_by_id	50 entities	$$3.90 \mathrm{ms} \pm 20.2 \mathrm{μs}\left({\color{gray}-3.515 \mathrm{\%}}\right) $$	Flame Graph
entity_by_id	1 entities	$$1.87 \mathrm{ms} \pm 11.5 \mathrm{μs}\left({\color{gray}0.645 \mathrm{\%}}\right) $$	Flame Graph
entity_by_id	25 entities	$$2.59 \mathrm{ms} \pm 14.1 \mathrm{μs}\left({\color{lightgreen}-17.041 \mathrm{\%}}\right) $$	Flame Graph
entity_by_id	5 entities	$$1.91 \mathrm{ms} \pm 14.5 \mathrm{μs}\left({\color{gray}0.305 \mathrm{\%}}\right) $$	Flame Graph

scaling_read_entity_linkless

Function	Value	Mean	Flame graphs
entity_by_id	10 entities	$$1.88 \mathrm{ms} \pm 9.25 \mathrm{μs}\left({\color{gray}1.38 \mathrm{\%}}\right) $$	Flame Graph
entity_by_id	100 entities	$$2.02 \mathrm{ms} \pm 9.15 \mathrm{μs}\left({\color{gray}1.87 \mathrm{\%}}\right) $$	Flame Graph
entity_by_id	1000 entities	$$2.72 \mathrm{ms} \pm 12.8 \mathrm{μs}\left({\color{gray}-0.935 \mathrm{\%}}\right) $$	Flame Graph
entity_by_id	1 entities	$$1.86 \mathrm{ms} \pm 9.59 \mathrm{μs}\left({\color{gray}0.378 \mathrm{\%}}\right) $$	Flame Graph
entity_by_id	10000 entities	$$12.8 \mathrm{ms} \pm 125 \mathrm{μs}\left({\color{gray}-0.200 \mathrm{\%}}\right) $$	Flame Graph

representative_read_entity_type

Function	Value	Mean	Flame graphs
get_entity_type_by_id	Account ID: d4e16033-c281-4cde-aa35-9085bf2e7579	$$1.41 \mathrm{ms} \pm 5.09 \mathrm{μs}\left({\color{gray}0.141 \mathrm{\%}}\right) $$	Flame Graph

representative_read_entity

Function	Value	Mean	Flame graphs
entity_by_id	entity type ID: https://blockprotocol.org/@alice/types/entity-type/organization/v/1	$$16.3 \mathrm{ms} \pm 161 \mathrm{μs}\left({\color{gray}0.517 \mathrm{\%}}\right) $$	Flame Graph
entity_by_id	entity type ID: https://blockprotocol.org/@alice/types/entity-type/book/v/1	$$15.5 \mathrm{ms} \pm 191 \mathrm{μs}\left({\color{lightgreen}-5.750 \mathrm{\%}}\right) $$	Flame Graph
entity_by_id	entity type ID: https://blockprotocol.org/@alice/types/entity-type/playlist/v/1	$$15.7 \mathrm{ms} \pm 175 \mathrm{μs}\left({\color{gray}-2.938 \mathrm{\%}}\right) $$	Flame Graph
entity_by_id	entity type ID: https://blockprotocol.org/@alice/types/entity-type/building/v/1	$$16.2 \mathrm{ms} \pm 156 \mathrm{μs}\left({\color{gray}4.78 \mathrm{\%}}\right) $$	Flame Graph
entity_by_id	entity type ID: https://blockprotocol.org/@alice/types/entity-type/song/v/1	$$15.8 \mathrm{ms} \pm 173 \mathrm{μs}\left({\color{gray}1.78 \mathrm{\%}}\right) $$	Flame Graph
entity_by_id	entity type ID: https://blockprotocol.org/@alice/types/entity-type/uk-address/v/1	$$16.8 \mathrm{ms} \pm 202 \mathrm{μs}\left({\color{red}5.17 \mathrm{\%}}\right) $$	Flame Graph
entity_by_id	entity type ID: https://blockprotocol.org/@alice/types/entity-type/person/v/1	$$16.0 \mathrm{ms} \pm 177 \mathrm{μs}\left({\color{gray}-0.050 \mathrm{\%}}\right) $$	Flame Graph
entity_by_id	entity type ID: https://blockprotocol.org/@alice/types/entity-type/block/v/1	$$16.1 \mathrm{ms} \pm 163 \mathrm{μs}\left({\color{lightgreen}-33.771 \mathrm{\%}}\right) $$	Flame Graph
entity_by_id	entity type ID: https://blockprotocol.org/@alice/types/entity-type/page/v/2	$$15.9 \mathrm{ms} \pm 157 \mathrm{μs}\left({\color{gray}-3.212 \mathrm{\%}}\right) $$	Flame Graph

representative_read_multiple_entities

Function	Value	Mean	Flame graphs
link_by_source_by_property	depths: DT=2, PT=2, ET=2, E=2	$$96.4 \mathrm{ms} \pm 463 \mathrm{μs}\left({\color{gray}-0.573 \mathrm{\%}}\right) $$	Flame Graph
link_by_source_by_property	depths: DT=0, PT=0, ET=0, E=2	$$77.4 \mathrm{ms} \pm 404 \mathrm{μs}\left({\color{gray}-0.976 \mathrm{\%}}\right) $$	Flame Graph
link_by_source_by_property	depths: DT=0, PT=0, ET=0, E=0	$$40.5 \mathrm{ms} \pm 199 \mathrm{μs}\left({\color{gray}-1.077 \mathrm{\%}}\right) $$	Flame Graph
link_by_source_by_property	depths: DT=0, PT=0, ET=2, E=2	$$87.8 \mathrm{ms} \pm 529 \mathrm{μs}\left({\color{gray}-0.626 \mathrm{\%}}\right) $$	Flame Graph
link_by_source_by_property	depths: DT=0, PT=2, ET=2, E=2	$$93.1 \mathrm{ms} \pm 424 \mathrm{μs}\left({\color{gray}0.653 \mathrm{\%}}\right) $$	Flame Graph
link_by_source_by_property	depths: DT=255, PT=255, ET=255, E=255	$$103 \mathrm{ms} \pm 464 \mathrm{μs}\left({\color{gray}-1.105 \mathrm{\%}}\right) $$	Flame Graph
entity_by_property	depths: DT=2, PT=2, ET=2, E=2	$$56.3 \mathrm{ms} \pm 357 \mathrm{μs}\left({\color{gray}0.067 \mathrm{\%}}\right) $$	Flame Graph
entity_by_property	depths: DT=0, PT=0, ET=0, E=2	$$41.2 \mathrm{ms} \pm 214 \mathrm{μs}\left({\color{gray}-1.117 \mathrm{\%}}\right) $$	Flame Graph
entity_by_property	depths: DT=0, PT=0, ET=0, E=0	$$37.2 \mathrm{ms} \pm 170 \mathrm{μs}\left({\color{gray}-0.535 \mathrm{\%}}\right) $$	Flame Graph
entity_by_property	depths: DT=0, PT=0, ET=2, E=2	$$47.8 \mathrm{ms} \pm 217 \mathrm{μs}\left({\color{gray}-1.009 \mathrm{\%}}\right) $$	Flame Graph
entity_by_property	depths: DT=0, PT=2, ET=2, E=2	$$52.2 \mathrm{ms} \pm 286 \mathrm{μs}\left({\color{gray}-0.562 \mathrm{\%}}\right) $$	Flame Graph
entity_by_property	depths: DT=255, PT=255, ET=255, E=255	$$64.3 \mathrm{ms} \pm 210 \mathrm{μs}\left({\color{gray}-1.085 \mathrm{\%}}\right) $$	Flame Graph