sv-linx-v1.4
·
17012 commits
to master
since this release
- Disruptive definition is changed for sv breakends. Small chained templated insertions (<5k bases) into or from intronic sections are no longer considered disruptive and will not be reported in the SV section of the report
- The number of undisrupted copies is calculated for each disruptive breakend
- Homozygous disruptions are now reported as drivers by LINX and are in the driver catalog
- Each amplification, deletion or LOH driver in the driver catalog is now linked to the SVs that caused it in the svDriver table
- Breakends in the 3’UTR region of the upstream gene are permitted to form fusions via exon skipping