Generate temporary files at local directory if output is set to stdout#158

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mourisl wants to merge 11 commits intomasterfrom li_dev5

+6

Commits on Sep 6, 2023

Move li_dev4's content to li_dev5, including no-sorting read-format, and overflow of fragment length
mourisl
committed

Commits on Dec 14, 2023

Commits on Dec 22, 2023

Commits on Dec 25, 2023

Fix a bug in summary the alignment stats when outputing SAM format
mourisl
committed

Commits on Jan 4, 2024

Update readme
mourisl
committed

Commits on Jan 26, 2024

Commits on Feb 22, 2024

Use local directory to hold tempoary files when the output file is to stdout or stderr
mourisl
committed

Commits on Mar 31, 2024

Merge remote-tracking branch 'origin' into li_dev5
mourisl
committed