xfails

hail-is · Mar 20, 2023 · e5a50f5 · e5a50f5
1 parent 3730068
commit e5a50f5
Showing 1 changed file with 0 additions and 7 deletions.
diff --git a/hail/python/test/hail/methods/test_statgen.py b/hail/python/test/hail/methods/test_statgen.py
@@ -1440,7 +1440,6 @@ def test_issue_4527(self):
         self.assertEqual(1, mt._force_count_rows())
 
     @fails_service_backend()
-    @fails_local_backend()
     def test_ld_prune(self):
         r2_threshold = 0.001
         window_size = 5
@@ -1485,22 +1484,19 @@ def test_ld_prune_inputs(self):
         self.assertRaises(ValueError, lambda: hl.ld_prune(ds.GT, r2=2.0))
 
     @fails_service_backend()
-    @fails_local_backend()
     def test_ld_prune_no_prune(self):
         ds = hl.balding_nichols_model(n_populations=1, n_samples=10, n_variants=10, n_partitions=3)
         pruned_table = hl.ld_prune(ds.GT, r2=0.0, bp_window_size=0)
         expected_count = ds.filter_rows(agg.collect_as_set(ds.GT).size() > 1, keep=True).count_rows()
         self.assertEqual(pruned_table.count(), expected_count)
 
     @fails_service_backend()
-    @fails_local_backend()
     def test_ld_prune_identical_variants(self):
         ds = hl.import_vcf(resource('ldprune2.vcf'), min_partitions=2)
         pruned_table = hl.ld_prune(ds.GT)
         self.assertEqual(pruned_table.count(), 1)
 
     @fails_service_backend()
-    @fails_local_backend()
     def test_ld_prune_maf(self):
         ds = hl.balding_nichols_model(n_populations=1, n_samples=50, n_variants=10, n_partitions=10).cache()
 
@@ -1516,23 +1512,20 @@ def test_ld_prune_maf(self):
         self.assertEqual(kept_maf, max(ht.maf.collect()))
 
     @fails_service_backend()
-    @fails_local_backend()
     def test_ld_prune_call_expression(self):
         ds = hl.import_vcf(resource("ldprune2.vcf"), min_partitions=2)
         ds = ds.select_entries(foo=ds.GT)
         pruned_table = hl.ld_prune(ds.foo)
         self.assertEqual(pruned_table.count(), 1)
 
     @fails_service_backend()
-    @fails_local_backend()
     def test_ld_prune_missing_entries(self):
         mt = hl.import_vcf(resource("ldprune2.vcf"), min_partitions=2).add_col_index()
         mt = mt.filter_entries(mt.col_idx > 1)
         result = hl.ld_prune(mt.GT)
         assert result.count() > 0
 
     @fails_service_backend()
-    @fails_local_backend()
     def test_ld_prune_with_duplicate_row_keys(self):
         ds = hl.import_vcf(resource('ldprune2.vcf'), min_partitions=2)
         ds_duplicate = ds.annotate_rows(duplicate=[1, 2]).explode_rows('duplicate')