regenerate requirements

hail-is · Jun 1, 2023 · 6b4be59 · 6b4be59
1 parent 8bf2011
commit 6b4be59
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diff --git a/auth/pinned-requirements.txt b/auth/pinned-requirements.txt
@@ -4,73 +4,3 @@
 #
 #    pip-compile --output-file=hail/auth/pinned-requirements.txt hail/auth/requirements.txt
 #
-cachetools==5.3.0
-    # via
-    #   -c hail/auth/../gear/pinned-requirements.txt
-    #   -c hail/auth/../hail/python/pinned-requirements.txt
-    #   google-auth
-certifi==2022.12.7
-    # via
-    #   -c hail/auth/../gear/pinned-requirements.txt
-    #   -c hail/auth/../hail/python/dev/pinned-requirements.txt
-    #   -c hail/auth/../hail/python/pinned-requirements.txt
-    #   requests
-charset-normalizer==3.1.0
-    # via
-    #   -c hail/auth/../gear/pinned-requirements.txt
-    #   -c hail/auth/../hail/python/dev/pinned-requirements.txt
-    #   -c hail/auth/../hail/python/pinned-requirements.txt
-    #   -c hail/auth/../web_common/pinned-requirements.txt
-    #   requests
-google-auth==2.17.3
-    # via
-    #   -c hail/auth/../gear/pinned-requirements.txt
-    #   -c hail/auth/../hail/python/pinned-requirements.txt
-    #   google-auth-oauthlib
-google-auth-oauthlib==0.8.0
-    # via -r hail/auth/requirements.txt
-idna==3.4
-    # via
-    #   -c hail/auth/../gear/pinned-requirements.txt
-    #   -c hail/auth/../hail/python/dev/pinned-requirements.txt
-    #   -c hail/auth/../hail/python/pinned-requirements.txt
-    #   -c hail/auth/../web_common/pinned-requirements.txt
-    #   requests
-oauthlib==3.2.2
-    # via requests-oauthlib
-pyasn1==0.5.0
-    # via
-    #   -c hail/auth/../gear/pinned-requirements.txt
-    #   -c hail/auth/../hail/python/pinned-requirements.txt
-    #   pyasn1-modules
-    #   rsa
-pyasn1-modules==0.3.0
-    # via
-    #   -c hail/auth/../gear/pinned-requirements.txt
-    #   -c hail/auth/../hail/python/pinned-requirements.txt
-    #   google-auth
-requests==2.28.2
-    # via
-    #   -c hail/auth/../gear/pinned-requirements.txt
-    #   -c hail/auth/../hail/python/dev/pinned-requirements.txt
-    #   -c hail/auth/../hail/python/pinned-requirements.txt
-    #   requests-oauthlib
-requests-oauthlib==1.3.1
-    # via google-auth-oauthlib
-rsa==4.9
-    # via
-    #   -c hail/auth/../gear/pinned-requirements.txt
-    #   -c hail/auth/../hail/python/pinned-requirements.txt
-    #   google-auth
-six==1.16.0
-    # via
-    #   -c hail/auth/../gear/pinned-requirements.txt
-    #   -c hail/auth/../hail/python/dev/pinned-requirements.txt
-    #   -c hail/auth/../hail/python/pinned-requirements.txt
-    #   google-auth
-urllib3==1.26.15
-    # via
-    #   -c hail/auth/../gear/pinned-requirements.txt
-    #   -c hail/auth/../hail/python/dev/pinned-requirements.txt
-    #   -c hail/auth/../hail/python/pinned-requirements.txt
-    #   requests
diff --git a/auth/requirements.txt b/auth/requirements.txt
@@ -2,4 +2,3 @@
 -c ../hail/python/dev/pinned-requirements.txt
 -c ../gear/pinned-requirements.txt
 -c ../web_common/pinned-requirements.txt
-google-auth-oauthlib>=0.5.2,<1
diff --git a/batch/pinned-requirements.txt b/batch/pinned-requirements.txt
@@ -103,7 +103,7 @@ tenacity==8.2.2
     # via
     #   -c hail/batch/../hail/python/pinned-requirements.txt
     #   plotly
-typing-extensions==4.5.0
+typing-extensions==4.6.2
     # via
     #   -c hail/batch/../hail/python/dev/pinned-requirements.txt
     #   -c hail/batch/../hail/python/pinned-requirements.txt
@@ -112,7 +112,7 @@ tzdata==2023.3
     # via
     #   -c hail/batch/../hail/python/pinned-requirements.txt
     #   pandas
-yarl==1.9.1
+yarl==1.9.2
     # via
     #   -c hail/batch/../gear/pinned-requirements.txt
     #   -c hail/batch/../hail/python/pinned-requirements.txt

diff --git a/ci/pinned-requirements.txt b/ci/pinned-requirements.txt
@@ -4,7 +4,7 @@
 #
 #    pip-compile --output-file=hail/ci/pinned-requirements.txt hail/ci/requirements.txt
 #
-certifi==2022.12.7
+certifi==2023.5.7
     # via
     #   -c hail/ci/../gear/pinned-requirements.txt
     #   -c hail/ci/../hail/python/dev/pinned-requirements.txt
@@ -48,18 +48,18 @@ pycparser==2.21
     #   -c hail/ci/../hail/python/dev/pinned-requirements.txt
     #   -c hail/ci/../hail/python/pinned-requirements.txt
     #   cffi
-pyjwt[crypto]==2.6.0
+pyjwt[crypto]==2.7.0
     # via
     #   -c hail/ci/../hail/python/pinned-requirements.txt
     #   gidgethub
-requests[security]==2.28.2
+requests[security]==2.31.0
     # via
     #   -c hail/ci/../gear/pinned-requirements.txt
     #   -c hail/ci/../hail/python/dev/pinned-requirements.txt
     #   -c hail/ci/../hail/python/pinned-requirements.txt
     #   matrix-client
     #   zulip
-typing-extensions==4.5.0
+typing-extensions==4.6.2
     # via
     #   -c hail/ci/../hail/python/dev/pinned-requirements.txt
     #   -c hail/ci/../hail/python/pinned-requirements.txt
@@ -68,7 +68,7 @@ uritemplate==4.1.1
     # via
     #   -c hail/ci/../gear/pinned-requirements.txt
     #   gidgethub
-urllib3==1.26.15
+urllib3==1.26.16
     # via
     #   -c hail/ci/../gear/pinned-requirements.txt
     #   -c hail/ci/../hail/python/dev/pinned-requirements.txt

diff --git a/gear/pinned-requirements.txt b/gear/pinned-requirements.txt
@@ -35,7 +35,7 @@ cachetools==5.3.0
     #   -c hail/gear/../hail/python/hailtop/pinned-requirements.txt
     #   -c hail/gear/../hail/python/pinned-requirements.txt
     #   google-auth
-certifi==2022.12.7
+certifi==2023.5.7
     # via
     #   -c hail/gear/../hail/python/dev/pinned-requirements.txt
     #   -c hail/gear/../hail/python/hailtop/pinned-requirements.txt
@@ -60,9 +60,9 @@ google-api-core==2.11.0
     #   -c hail/gear/../hail/python/hailtop/pinned-requirements.txt
     #   -c hail/gear/../hail/python/pinned-requirements.txt
     #   google-api-python-client
-google-api-python-client==2.86.0
+google-api-python-client==2.87.0
     # via google-cloud-profiler
-google-auth==2.17.3
+google-auth==2.18.1
     # via
     #   -c hail/gear/../hail/python/hailtop/pinned-requirements.txt
     #   -c hail/gear/../hail/python/pinned-requirements.txt
@@ -100,14 +100,14 @@ multidict==6.0.4
     #   -c hail/gear/../hail/python/pinned-requirements.txt
     #   aiohttp
     #   yarl
-orjson==3.8.10
+orjson==3.8.13
     # via
     #   -c hail/gear/../hail/python/hailtop/pinned-requirements.txt
     #   -c hail/gear/../hail/python/pinned-requirements.txt
     #   -r hail/gear/requirements.txt
 prometheus-async==19.2.0
     # via -r hail/gear/requirements.txt
-prometheus-client==0.16.0
+prometheus-client==0.17.0
     # via
     #   -c hail/gear/../hail/python/dev/pinned-requirements.txt
     #   -r hail/gear/requirements.txt
@@ -148,7 +148,7 @@ pyyaml==6.0
     #   -c hail/gear/../hail/python/dev/pinned-requirements.txt
     #   -c hail/gear/../hail/python/pinned-requirements.txt
     #   kubernetes-asyncio
-requests==2.28.2
+requests==2.31.0
     # via
     #   -c hail/gear/../hail/python/dev/pinned-requirements.txt
     #   -c hail/gear/../hail/python/hailtop/pinned-requirements.txt
@@ -176,19 +176,20 @@ sortedcontainers==2.4.0
     #   -r hail/gear/requirements.txt
 uritemplate==4.1.1
     # via google-api-python-client
-urllib3==1.26.15
+urllib3==1.26.16
     # via
     #   -c hail/gear/../hail/python/dev/pinned-requirements.txt
     #   -c hail/gear/../hail/python/hailtop/pinned-requirements.txt
     #   -c hail/gear/../hail/python/pinned-requirements.txt
+    #   google-auth
     #   kubernetes-asyncio
     #   requests
 wrapt==1.15.0
     # via
     #   -c hail/gear/../hail/python/dev/pinned-requirements.txt
     #   -c hail/gear/../hail/python/pinned-requirements.txt
     #   prometheus-async
-yarl==1.9.1
+yarl==1.9.2
     # via
     #   -c hail/gear/../hail/python/hailtop/pinned-requirements.txt
     #   -c hail/gear/../hail/python/pinned-requirements.txt

diff --git a/hail/python/dev/pinned-requirements.txt b/hail/python/dev/pinned-requirements.txt
@@ -36,7 +36,7 @@ black==22.12.0
     # via -r hail/hail/python/dev/requirements.txt
 bleach==6.0.0
     # via nbconvert
-certifi==2022.12.7
+certifi==2023.5.7
     # via
     #   -c hail/hail/python/dev/../pinned-requirements.txt
     #   requests
@@ -86,7 +86,7 @@ execnet==1.9.0
     # via pytest-xdist
 executing==1.2.0
     # via stack-data
-fastjsonschema==2.16.3
+fastjsonschema==2.17.1
     # via nbformat
 fonttools==4.39.4
     # via matplotlib
@@ -181,7 +181,7 @@ jupyter-core==5.3.0
     #   qtconsole
 jupyter-events==0.6.3
     # via jupyter-server
-jupyter-server==2.5.0
+jupyter-server==2.6.0
     # via
     #   nbclassic
     #   notebook-shim
@@ -218,7 +218,7 @@ mypy-extensions==1.0.0
     #   mypy
 nbclassic==1.0.0
     # via notebook
-nbclient==0.7.4
+nbclient==0.8.0
     # via nbconvert
 nbconvert==7.4.0
     # via
@@ -235,7 +235,7 @@ nbformat==5.8.0
     #   nbconvert
     #   nbsphinx
     #   notebook
-nbsphinx==0.9.1
+nbsphinx==0.9.2
     # via -r hail/hail/python/dev/requirements.txt
 nest-asyncio==1.5.6
     # via
@@ -252,6 +252,8 @@ numpy==1.24.3
     #   -c hail/hail/python/dev/../pinned-requirements.txt
     #   contourpy
     #   matplotlib
+overrides==7.3.1
+    # via jupyter-server
 packaging==23.1
     # via
     #   -c hail/hail/python/dev/../pinned-requirements.txt
@@ -290,7 +292,7 @@ platformdirs==3.5.1
     #   pylint
 pluggy==1.0.0
     # via pytest
-prometheus-client==0.16.0
+prometheus-client==0.17.0
     # via
     #   jupyter-server
     #   nbclassic
@@ -383,7 +385,7 @@ qtconsole==5.4.3
     # via jupyter
 qtpy==2.3.1
     # via qtconsole
-requests==2.28.2
+requests==2.31.0
     # via
     #   -c hail/hail/python/dev/../pinned-requirements.txt
     #   sphinx
@@ -395,7 +397,7 @@ rfc3986-validator==0.1.1
     # via
     #   jsonschema
     #   jupyter-events
-ruff==0.0.267
+ruff==0.0.270
     # via -r hail/hail/python/dev/requirements.txt
 send2trash==1.8.2
     # via
@@ -425,7 +427,7 @@ sphinx==6.2.1
     #   sphinxcontrib-katex
 sphinx-autodoc-typehints==1.23.0
     # via -r hail/hail/python/dev/requirements.txt
-sphinx-rtd-theme==1.2.0
+sphinx-rtd-theme==1.2.1
     # via -r hail/hail/python/dev/requirements.txt
 sphinxcontrib-applehelp==1.0.4
     # via sphinx
@@ -501,11 +503,11 @@ types-pymysql==1.0.19.7
     # via -r hail/hail/python/dev/requirements.txt
 types-python-dateutil==2.8.19.13
     # via -r hail/hail/python/dev/requirements.txt
-types-pyyaml==6.0.12.9
+types-pyyaml==6.0.12.10
     # via -r hail/hail/python/dev/requirements.txt
-types-requests==2.30.0.0
+types-requests==2.31.0.0
     # via -r hail/hail/python/dev/requirements.txt
-types-setuptools==67.7.0.2
+types-setuptools==67.8.0.0
     # via -r hail/hail/python/dev/requirements.txt
 types-six==1.16.21.8
     # via -r hail/hail/python/dev/requirements.txt
@@ -515,7 +517,7 @@ types-urllib3==1.26.25.13
     # via
     #   -r hail/hail/python/dev/requirements.txt
     #   types-requests
-typing-extensions==4.5.0
+typing-extensions==4.6.2
     # via
     #   -c hail/hail/python/dev/../pinned-requirements.txt
     #   astroid
@@ -525,7 +527,7 @@ typing-extensions==4.5.0
     #   pylint
 uri-template==1.2.0
     # via jsonschema
-urllib3==1.26.15
+urllib3==1.26.16
     # via
     #   -c hail/hail/python/dev/../pinned-requirements.txt
     #   requests
@@ -537,7 +539,7 @@ webencodings==0.5.1
     # via
     #   bleach
     #   tinycss2
-websocket-client==1.5.1
+websocket-client==1.5.2
     # via jupyter-server
 widgetsnbextension==4.0.7
     # via ipywidgets