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comment out pacbio step for now (nyi) nf-core CI #130: Commit 27e8678 pushed by cjfields
January 6, 2025 22:37 9m 23s dev
dev
January 6, 2025 22:37 9m 23s
add more params to mirror run on main branch but using snake case params nf-core CI #129: Commit 1943e9d pushed by cjfields
January 6, 2025 22:36 1m 40s dev
dev
January 6, 2025 22:36 1m 40s
set up data for basic CI testing (miseq) nf-core CI #128: Commit 0d5251f pushed by cjfields
January 6, 2025 22:25 2m 57s dev
dev
January 6, 2025 22:25 2m 57s
only build docker images on docker branches or with a tagged release nf-core CI #127: Commit 390e262 pushed by cjfields
January 6, 2025 22:02 2m 44s dev
dev
January 6, 2025 22:02 2m 44s
Comment out the cleanup, which seems to require a PAT; it may be set … Docker #13: Commit b2331fc pushed by cjfields
January 3, 2025 21:32 13m 33s docker/dada2-binned
docker/dada2-binned
January 3, 2025 21:32 13m 33s
fix yaml; set dry run to true and limit to repo/package Docker #12: Commit 39d5766 pushed by cjfields
January 3, 2025 17:57 13m 32s docker/dada2-binned
docker/dada2-binned
January 3, 2025 17:57 13m 32s
fix repo owner Docker #11: Commit 5c97af2 pushed by cjfields
January 3, 2025 17:52 1m 7s docker/dada2-binned
docker/dada2-binned
January 3, 2025 17:52 1m 7s
test docker cleaning; may need permissions tweaks Docker #10: Commit 44f5e80 pushed by cjfields
January 3, 2025 17:49 2m 15s docker/dada2-binned
docker/dada2-binned
January 3, 2025 17:49 2m 15s
test docker cleaning; may need permissions tweaks Docker #9: Commit 907e86a pushed by cjfields
January 3, 2025 17:37 Failure docker/dada2-binned
docker/dada2-binned
January 3, 2025 17:37 Failure
fix CI Docker #8: Commit 8c130ca pushed by cjfields
January 3, 2025 15:10 13m 28s docker/dada2-binned
docker/dada2-binned
January 3, 2025 15:10 13m 28s
test docker builds on specific branches under 'docker/*' Docker #7: Commit 828a27f pushed by cjfields
January 3, 2025 15:01 9m 9s docker/dada2-binned
docker/dada2-binned
January 3, 2025 15:01 9m 9s
test docker builds on specific branches under 'docker/*' nf-core CI #126: Commit 828a27f pushed by cjfields
January 3, 2025 15:01 Failure docker/dada2-binned
docker/dada2-binned
January 3, 2025 15:01 Failure
fix workflow syntax Docker #6: Commit c43465d pushed by cjfields
December 23, 2024 21:54 13m 0s dev
dev
December 23, 2024 21:54 13m 0s
add updated docker image for development; need to decide on whether a… nf-core CI #125: Commit 3b58f43 pushed by cjfields
December 23, 2024 21:52 Failure docker/dada2-binned
docker/dada2-binned
December 23, 2024 21:52 Failure
revert to original dada2 install; we may move the docker generation o… Docker #5: Commit c3a4dd9 pushed by cjfields
December 23, 2024 21:49 12m 45s dev
dev
December 23, 2024 21:49 12m 45s
revert to original dada2 install; we may move the docker generation o… nf-core CI #124: Commit c3a4dd9 pushed by cjfields
December 23, 2024 21:49 Failure dev
dev
December 23, 2024 21:49 Failure
test out overwritting with dev version Docker #4: Commit 12af9e0 pushed by cjfields
December 23, 2024 04:56 13m 29s dev
dev
December 23, 2024 04:56 13m 29s
test out overwritting with dev version nf-core CI #123: Commit 12af9e0 pushed by cjfields
December 23, 2024 04:56 Failure dev
dev
December 23, 2024 04:56 Failure
test out overwritting with dev version .github/workflows/linting.yml #24: Commit 12af9e0 pushed by cjfields
December 23, 2024 04:56 Failure dev
dev
December 23, 2024 04:56 Failure
try installing dada2 normally, seeing error (may be upgrade to r 4.4.2) Docker #3: Commit 242ea81 pushed by cjfields
December 23, 2024 04:30 13m 10s dev
dev
December 23, 2024 04:30 13m 10s
try installing dada2 normally, seeing error (may be upgrade to r 4.4.2) nf-core CI #122: Commit 242ea81 pushed by cjfields
December 23, 2024 04:30 15s dev
dev
December 23, 2024 04:30 15s
try installing dada2 normally, seeing error (may be upgrade to r 4.4.2) .github/workflows/linting.yml #23: Commit 242ea81 pushed by cjfields
December 23, 2024 04:30 51s dev
dev
December 23, 2024 04:30 51s
Test tags and see if this builds a dev package with github version of… nf-core CI #121: Commit e660282 pushed by cjfields
December 23, 2024 04:11 18s dev
dev
December 23, 2024 04:11 18s
Test tags and see if this builds a dev package with github version of… .github/workflows/linting.yml #22: Commit e660282 pushed by cjfields
December 23, 2024 04:11 1m 0s dev
dev
December 23, 2024 04:11 1m 0s
Test tags and see if this builds a dev package with github version of… Docker #2: Commit e660282 pushed by cjfields
December 23, 2024 04:11 9m 16s dev
dev
December 23, 2024 04:11 9m 16s