gunrock · neoblizz · May 3, 2022 · Feb 15, 2022 · Feb 18, 2022 · Feb 18, 2022
diff --git a/.gitignore b/.gitignore
@@ -36,6 +36,11 @@ eval/
 
 # Ignore build directory
 build
+build_release
+build_debug
 
 # Ignore external fetched content
 externals/*
+
+# Ignore slurm files
+slurm-*.out
diff --git a/CMakeLists.txt b/CMakeLists.txt
@@ -37,6 +37,8 @@ set(PROJECT_DEPS_DIR externals)
 include(${PROJECT_SOURCE_DIR}/cmake/FetchThrustCUB.cmake)
 include(${PROJECT_SOURCE_DIR}/cmake/FetchModernGPU.cmake)
 include(${PROJECT_SOURCE_DIR}/cmake/FetchCXXOpts.cmake)
+include(${PROJECT_SOURCE_DIR}/cmake/FetchRapidJSON.cmake)
+include(${PROJECT_SOURCE_DIR}/cmake/FetchNlohmannJson.cmake)
 # end /* Include cmake modules */
 
 ## Set the directory where the binaries will be stored
@@ -111,6 +113,7 @@ target_include_directories(essentials
   INTERFACE ${CUB_INCLUDE_DIR}
   INTERFACE ${MODERNGPU_INCLUDE_DIR}
   INTERFACE ${RAPIDJSON_INCLUDE_DIR}
+  INTERFACE ${NHLOMANN_JSON_INCLUDE_DIR}
   INTERFACE ${CMAKE_CUDA_TOOLKIT_INCLUDE_DIRECTORIES}
 )
 
@@ -120,6 +123,7 @@ target_include_directories(essentials
 target_link_libraries(essentials
   INTERFACE curand
   INTERFACE cuda
+  INTERFACE cusparse
 )
 
 ####################################################
@@ -162,6 +166,9 @@ set(CUDA_FLAGS
   # --device-debug # Device debug
 )
 
+set(CMAKE_CUDA_FLAGS_DEBUG "--optimize 0 --debug --device-debug -g -G")
+set(CMAKE_CUDA_FLAGS_RELEASE "--optimize 3")
+
 ####################################################
 ############ TARGET COMPILE OPTIONS ################
 ####################################################
@@ -187,11 +194,12 @@ endif(ESSENTIALS_BUILD_EXAMPLES)
 ####################################################
 option(ESSENTIALS_BUILD_TESTS
   "If on, builds the unit tests."
-  OFF)
+  ON)
 
 # Subdirectories for examples, testing and documentation
 if(ESSENTIALS_BUILD_TESTS)
   include(${PROJECT_SOURCE_DIR}/cmake/FetchGoogleTest.cmake)
+  enable_testing()
   add_subdirectory(unittests)
 endif(ESSENTIALS_BUILD_TESTS)
 

diff --git a/Makefile b/Makefile
@@ -0,0 +1,28 @@
+# Simple Makefile to handle release/debug modes
+# As well as other CMake command line args
+# (which are hard to type and remember)
+
+all: release
+
+release:
+	mkdir -p build_release
+	cd build_release && cmake -DCMAKE_BUILD_TYPE=RELEASE ..
+	$(MAKE) -C ./build_release
+
+debug:
+	mkdir -p build_debug
+	cd build_debug && cmake -DCMAKE_BUILD_TYPE=DEBUG ..
+	$(MAKE) -C ./build_debug
+
+test: release
+	./build_release/bin/unittests
+
+test_release: test
+
+test_debug: debug
+	./build_debug/bin/unittests
+
+clean:
+	rm -rf build_debug
+	rm -rf build_release
+	rm -rf externals
diff --git a/cmake/FetchNlohmannJson.cmake b/cmake/FetchNlohmannJson.cmake
@@ -0,0 +1,21 @@
+include(FetchContent)
+set(FETCHCONTENT_QUIET ON)
+
+message(STATUS "Cloning External Project: NLohmannJson")
+get_filename_component(FC_BASE "../externals"
+                REALPATH BASE_DIR "${CMAKE_BINARY_DIR}")
+set(FETCHCONTENT_BASE_DIR ${FC_BASE})
+
+FetchContent_Declare(
+  json
+    GIT_REPOSITORY https://github.com/nlohmann/json.git
+    GIT_TAG        v3.10.5
+)
+
+FetchContent_GetProperties(json)
+if(NOT json_POPULATED)
+  FetchContent_Populate(
+    json
+  )
+endif()
+set(NHLOMANN_JSON_INCLUDE_DIR "${json_SOURCE_DIR}/include")
diff --git a/cmake/FetchRapidJSON.cmake b/cmake/FetchRapidJSON.cmake
@@ -0,0 +1,21 @@
+include(FetchContent)
+set(FETCHCONTENT_QUIET ON)
+
+message(STATUS "Cloning External Project: RapidJSON")
+get_filename_component(FC_BASE "../externals"
+                REALPATH BASE_DIR "${CMAKE_BINARY_DIR}")
+set(FETCHCONTENT_BASE_DIR ${FC_BASE})
+
+FetchContent_Declare(
+  rapidjson
+    GIT_REPOSITORY https://github.com/Tencent/rapidjson
+    GIT_TAG        master
+)
+
+FetchContent_GetProperties(rapidjson)
+if(NOT rapidjson_POPULATED)
+  FetchContent_Populate(
+    rapidjson
+  )
+endif()
+set(RAPIDJSON_INCLUDE_DIR "${rapidjson_SOURCE_DIR}/include")
diff --git a/cmake/FetchThrustCUB.cmake b/cmake/FetchThrustCUB.cmake
@@ -9,7 +9,7 @@ set(FETCHCONTENT_BASE_DIR ${FC_BASE})
 FetchContent_Declare(
     thrust
     GIT_REPOSITORY https://github.com/thrust/thrust.git
-    GIT_TAG        1.15.0
+    GIT_TAG        1.16.0
 )
 
 FetchContent_GetProperties(thrust)

diff --git a/docs/advance_8hxx.html b/docs/advance_8hxx.html
diff --git a/docs/advance_8hxx.js b/docs/advance_8hxx.js
@@ -0,0 +1,5 @@
+var advance_8hxx =
+[
+    [ "execute", "advance_8hxx.html#a375f2d93a2fed300665eb525b7f84cc6", null ],
+    [ "execute", "advance_8hxx.html#a16dc398057f73c2220e3bceddd2137b0", null ]
+];
diff --git a/docs/advance_8hxx__dep__incl.map b/docs/advance_8hxx__dep__incl.map
@@ -0,0 +1,18 @@
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+<area shape="rect" id="node10" href="$hits_8hxx.html" title="Hyperlink&#45;Induced Topic Search. " alt="" coords="1080,421,1261,477"/>
+<area shape="rect" id="node11" href="$kcore_8hxx.html" title="Vertex k&#45;core decomposition algorithm. " alt="" coords="1285,421,1467,477"/>
+<area shape="rect" id="node12" href="$mst_8hxx.html" title="Minimum Spanning Tree algorithm. " alt="" coords="1491,421,1672,477"/>
+<area shape="rect" id="node13" href="$ppr_8hxx.html" title="Personalized Page&#45;Rank. " alt="" coords="1696,421,1877,477"/>
+<area shape="rect" id="node14" href="$pr_8hxx.html" title="PageRank. " alt="" coords="1901,429,2123,470"/>
+<area shape="rect" id="node15" href="$spgemm_8hxx.html" title="Sparse&#45;Matrix&#45;Matrix multiplication. " alt="" coords="2147,421,2328,477"/>
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+</map>
diff --git a/docs/advance_8hxx__dep__incl.md5 b/docs/advance_8hxx__dep__incl.md5
@@ -0,0 +1 @@
+967a34d64f697a3f8c7a9bae9507728c
diff --git a/docs/advance_8hxx__dep__incl.png b/docs/advance_8hxx__dep__incl.png
diff --git a/docs/advance_8hxx__incl.map b/docs/advance_8hxx__incl.map
@@ -0,0 +1,10 @@
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+</map>
diff --git a/docs/advance_8hxx__incl.md5 b/docs/advance_8hxx__incl.md5
@@ -0,0 +1 @@
+6a3b97bd5a82a7e94c7e0da7b1c122f6
diff --git a/docs/advance_8hxx__incl.png b/docs/advance_8hxx__incl.png
diff --git a/docs/advance_8hxx_source.html b/docs/advance_8hxx_source.html