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@greenelab

Greene Laboratory

Greene Laboratory at the University of Colorado Anschutz

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  1. scihub scihub Public

    Source code and data analyses for the Sci-Hub Coverage Study

    Jupyter Notebook 296 39

  2. BioBombe BioBombe Public

    BioBombe: Sequentially compressed gene expression features enhances biological signatures

    Jupyter Notebook 65 25

  3. lab-website-template lab-website-template Public template

    An easy-to-use, flexible website template for labs.

    HTML 384 325

  4. covid19-review covid19-review Public

    A collaborative review of the emerging COVID-19 literature. Join the chat here:

    TeX 117 81

  5. deep-review deep-review Public

    A collaboratively written review paper on deep learning, genomics, and precision medicine

    HTML 1.3k 270

  6. tybalt tybalt Public

    Training and evaluating a variational autoencoder for pan-cancer gene expression data

    HTML 165 62

Repositories

Showing 10 of 171 repositories
  • scrumlord Public

    Continuous administration of the Greene Lab's electronic scrum

    greenelab/scrumlord’s past year of commit activity
    Python 13 BSD-3-Clause 8 2 0 Updated Feb 3, 2025
  • deconvolution_sc_sn_comparison Public

    The following repository is a work in progress. The Aim is to deconvolve samples with SC and SN, comparing performance.

    greenelab/deconvolution_sc_sn_comparison’s past year of commit activity
    0 BSD-3-Clause 1 0 0 Updated Feb 3, 2025
  • lab-website-template Public template

    An easy-to-use, flexible website template for labs.

    greenelab/lab-website-template’s past year of commit activity
    HTML 384 BSD-3-Clause 325 6 0 Updated Feb 3, 2025
  • backup Public

    Backup a GitHub user's or organization's repos and wikis

    greenelab/backup’s past year of commit activity
    TypeScript 0 0 0 0 Updated Jan 31, 2025
  • deconvolution_adipocytes Public

    The following repository is a work in progress. the Aim is to deconvolve HGSOC samples with added adipocyte signal.

    greenelab/deconvolution_adipocytes’s past year of commit activity
    0 BSD-3-Clause 1 0 1 Updated Jan 30, 2025
  • greenelab.com Public

    The website source code for greenelab.com

    greenelab/greenelab.com’s past year of commit activity
    HTML 1 BSD-3-Clause 25 2 0 Updated Jan 30, 2025
  • lab-website-template-docs Public

    GitBook documentation for Lab Website Template

    greenelab/lab-website-template-docs’s past year of commit activity
    1 2 2 0 Updated Jan 27, 2025
  • ccc Public
    greenelab/ccc’s past year of commit activity
    Jupyter Notebook 23 9 2 0 Updated Jan 17, 2025
  • hclust Public

    Agglomerative hierarchical clustering in JavaScript

    greenelab/hclust’s past year of commit activity
    JavaScript 18 MIT 3 0 0 Updated Dec 17, 2024
  • pred_missing_celltypes Public

    Predicting missing cell-type proportions from deconvolution residual using NNLS.

    greenelab/pred_missing_celltypes’s past year of commit activity
    Jupyter Notebook 2 BSD-3-Clause 1 0 0 Updated Dec 17, 2024
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