🚇🩹🔧 Fix manifest check

[s-weigand]

Recently the manifest-check CI test started to fail, while I don't completely understand what is going on there it seems to be some kind of version mismatch between setuptools and distutils (python builtin) in the CI python env.
Raising the requirement for setuptool to be at least the current version fixes this issue (might also work with a lower version, but 56.0.0 was the one installed in the broken env).

Change summary

• 🩹🔧 Upgradegrade setuptools to >=62.4.0
• 🔧 Upgrade setuptools in the deploy step just to be on the save side

Checklist

• ✔️ Passing the tests (mandatory for all PR's)
• 🚧 Added changes to changelog (mandatory for all PR's)

[github-actions]

👈 Launch a binder notebook on branch s-weigand/pyglotaran/fix-manifest-check

[sonarqubecloud]

Kudos, SonarCloud Quality Gate passed!   

0 Bugs
0 Vulnerabilities
0 Security Hotspots
0 Code Smells

No Coverage information
0.7% Duplication

[codecov]

Codecov Report

Merging #1099 (ebbdbb7) into main (c047331) will not change coverage.
The diff coverage is n/a.

@@          Coverage Diff          @@
##            main   #1099   +/-   ##
=====================================
  Coverage   87.1%   87.1%           
=====================================
  Files        101     101           
  Lines       5339    5339           
  Branches     995     995           
=====================================
  Hits        4654    4654           
  Misses       530     530           
  Partials     155     155           

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[github-actions]

Benchmark is done. Checkout the benchmark result page.
Benchmark differences below 5% might be due to CI noise.

Benchmark diff v0.6.0 vs. main

Parametrized benchmark signatures:

BenchmarkOptimize.time_optimize(index_dependent, grouped, weight)

All benchmarks:

       before           after         ratio
     [6c3c390e]       [c047331d]
     <v0.6.0>                   
         79.7±2ms         79.3±1ms     0.99  BenchmarkOptimize.time_optimize(False, False, False)
         116±40ms          170±8ms    ~1.47  BenchmarkOptimize.time_optimize(False, False, True)
         78.6±2ms         78.6±1ms     1.00  BenchmarkOptimize.time_optimize(False, True, False)
         169±50ms         156±20ms     0.93  BenchmarkOptimize.time_optimize(False, True, True)
         96.5±1ms         98.0±3ms     1.02  BenchmarkOptimize.time_optimize(True, False, False)
         106±30ms          102±4ms     0.96  BenchmarkOptimize.time_optimize(True, False, True)
         96.3±1ms       97.3±0.9ms     1.01  BenchmarkOptimize.time_optimize(True, True, False)
         139±30ms         106±50ms    ~0.77  BenchmarkOptimize.time_optimize(True, True, True)
             205M             206M     1.00  IntegrationTwoDatasets.peakmem_optimize
       2.38±0.07s       2.42±0.02s     1.02  IntegrationTwoDatasets.time_optimize

Benchmark diff main vs. PR

Parametrized benchmark signatures:

BenchmarkOptimize.time_optimize(index_dependent, grouped, weight)

All benchmarks:

       before           after         ratio
     [c047331d]       [ebbdbb7f]
         79.3±1ms         80.0±1ms     1.01  BenchmarkOptimize.time_optimize(False, False, False)
          170±8ms         168±20ms     0.99  BenchmarkOptimize.time_optimize(False, False, True)
         78.6±1ms         79.0±3ms     1.01  BenchmarkOptimize.time_optimize(False, True, False)
         156±20ms         168±10ms     1.07  BenchmarkOptimize.time_optimize(False, True, True)
         98.0±3ms         95.7±2ms     0.98  BenchmarkOptimize.time_optimize(True, False, False)
          102±4ms          105±2ms     1.04  BenchmarkOptimize.time_optimize(True, False, True)
       97.3±0.9ms         99.8±1ms     1.03  BenchmarkOptimize.time_optimize(True, True, False)
         106±50ms          103±2ms     0.97  BenchmarkOptimize.time_optimize(True, True, True)
             206M             206M     1.00  IntegrationTwoDatasets.peakmem_optimize
       2.42±0.02s       2.38±0.07s     0.98  IntegrationTwoDatasets.time_optimize