Merge pull request #5 from LukasEin/main #15
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| name: github-codecov | |
| on: | |
| push: | |
| branches: | |
| - 'main' | |
| - 'docs' | |
| release: | |
| types: [created] | |
| jobs: | |
| build-codecov: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ["ubuntu-latest"] | |
| python-version: ["3.7"] | |
| # Shell needs to use login mode, which can be set globally within a job | |
| # https://github.com/marketplace/actions/setup-miniconda#important | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| # Cache npm modules | |
| - name: Cache node modules | |
| id: cache-npm | |
| uses: actions/cache@v3 | |
| env: | |
| cache-name: cache-node-modules | |
| with: | |
| # npm cache files are stored in `~/.npm` on Linux/macOS | |
| path: ~/.npm | |
| key: ${{ runner.os }}-npm-${{ env.cache-name }}-${{ hashFiles('**/package-lock.json') }} | |
| restore-keys: | | |
| ${{ runner.os }}-npm-${{ env.cache-name }}- | |
| ${{ runner.os }}-npm- | |
| # The following installs the repo and cd's to it | |
| - name: Checkout repo | |
| uses: actions/checkout@v3 | |
| # Install System Requirements | |
| # install requirements for docs, pyshtools | |
| - name: System Requirements | |
| run: ifconfig -a | |
| && sudo apt-get install doxygen python3-sphinx | |
| && sudo apt-get install libblas-dev liblapack-dev g++ gfortran libfftw3-dev tcsh | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: 'pip' | |
| - run: pip install -r requirements.txt | |
| # Install Conda Requirements | |
| - name: Cache conda | |
| uses: actions/cache@v2 | |
| env: | |
| # Increase this value to reset cache if etc/example-environment.yml has not changed | |
| CACHE_NUMBER: 0 | |
| with: | |
| path: ~/conda_pkgs_dir | |
| key: | |
| ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-${{ | |
| hashFiles('docs/conda/environment_docs.yml') }} | |
| - uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| auto-update-conda: true | |
| python-version: ${{ matrix.python-version }} | |
| activate-environment: avni-docs | |
| channel-priority: flexible | |
| channels: conda-forge | |
| allow-softlinks: true | |
| show-channel-urls: true | |
| environment-file: docs/conda/environment_docs.yml | |
| auto-activate-base: false | |
| use-only-tar-bz2: true # IMPORTANT: This needs to be set for caching to work properly! | |
| - run: | | |
| conda info | |
| conda list | |
| conda config --show-sources | |
| conda config --show | |
| - name: Generate coverage report | |
| run: | | |
| pip install -e . | |
| pip install pytest | |
| pip install pytest-cov | |
| pytest --cov=./ --cov-report=xml | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| directory: ./coverage/reports/ | |
| env_vars: OS,PYTHON | |
| fail_ci_if_error: true | |
| files: ./coverage.xml,!./cache | |
| flags: unittests | |
| name: codecov-umbrella | |
| verbose: true |