New features
In this release of alrecon
- process extended field of view scans
- visual sinogram loader
- custom sinogram normalization with separate flats and darks files
- keep track of completed tasks with a list of your reconstructions
- switched recon histogram plotter to matplotlib
- expert user settings for HPC cluster integration
- improved cluster and gspread integration instructions
- enable sinogram range job submit
- uses new
dxchange.reader.readbeats
- cluster jobs write reconstruction midplanes
- directory autocompletion ('recon', 'cor') based on experiment dir and dataset name
Improved features
- stripe removal through the alrecon interface and on slurm reconstruction jobs
- attempt gpsread load keys
Bug fixes
- free all processed data at new H5 file load
- deactivate napari viewers if
napari
not installed - deactivate napari viewers if
alrecon
is launched as local host app - moved gspread key path to local config file
-
config
anduser_config
YAML
files - disable buttons:
- Load if h5 file not selected
- COR if data not loaded
- Recon if data not loaded
- write recon if data not reconstructed
- napari proj if data not loaded
- napari recon if data not reconstructed