This repository uses the genomicsurveillance model to estimate daily growth rates of a variety of SARS-CoV-2 lineages in selected countries. It fits a logistic linear model to daily lineage counts using a Dirichlet-Multinomial model. The growth rates are modelled in a hierarchical Bayesian fashion using stochastic variational inference.
The model is described in detail in our publication Genomic reconstruction of the SARS-CoV-2 epidemic in England.
The current code pulls aggregated data from cov-spectrum.org; the underlying data is proved by GISAID. Case data is from Our World in Data.
Latest update: 2023-05-19, based on 9470740 genomic sequences.
Each dot represents a country (MAP estimate). Bars denote the shared mean, errorbars are the 90% posterior interval.
Other countries are grouped into geographic regions.
| Australia | Austria | Brazil | Brunei | Canada | Chile | Denmark | France | Germany | India | Indonesia | Israel | Japan | Mexico | Other - Africa | Other - Asia | Other - Europe | Other - North America | Other - Oceania | Other - South America | Russia | Singapore | South Africa | South Korea | Spain | Sweden | USA | United Kingdom | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| B.1.1.529 | -8±1 | -8±1 | -7±1 | <NA> | -4±1 | -3±1 | -5±1 | -9±1 | -5±1 | -4±1 | -5±6 | -4±1 | -4±1 | -3±1 | -5±1 | -5±1 | -8±1 | -11±1 | -9±1 | -9±1 | -8±1 | -5±2 | -11±1 | -26±8 | -5±1 | -5±1 | -4±1 | -8±1 |
| BA.1 | -16±0 | -15±0 | -14±0 | -19±1 | -17±0 | -17±0 | -18±0 | -17±0 | -17±0 | -12±0 | -14±0 | -18±0 | -18±0 | -14±0 | -14±0 | -13±0 | -16±0 | -16±0 | -21±0 | -14±0 | -15±0 | -17±0 | -16±0 | -20±0 | -16±0 | -17±0 | -16±0 | -17±0 |
| BA.1.1 | -14±0 | -13±0 | -13±0 | -18±1 | -15±0 | -16±0 | -13±0 | -15±0 | -15±0 | -11±0 | -15±0 | -15±0 | -15±0 | -12±0 | -13±0 | -11±0 | -13±0 | -15±0 | -14±0 | -13±0 | -14±0 | -10±0 | -14±0 | -16±0 | -14±0 | -13±0 | -14±0 | -14±0 |
| BA.2 | -8±0 | -8±0 | -8±0 | -11±1 | -10±0 | -10±0 | -9±0 | -8±0 | -9±0 | -4±0 | -7±0 | -8±0 | -8±0 | -7±0 | -6±0 | -5±0 | -8±0 | -9±0 | -9±0 | -7±0 | -9±0 | -4±0 | -9±0 | -9±0 | -7±0 | -9±0 | -8±0 | -8±0 |
| BA.2.3.20 | 3±0 | 3±0 | -4±3 | 8±1 | 4±0 | 4±1 | 3±0 | 5±0 | 4±0 | 9±1 | 5±1 | 4±0 | 3±0 | 5±1 | 2±1 | 2±0 | 4±0 | 2±1 | 3±0 | -3±2 | 5±0 | 4±0 | -2±2 | 3±0 | 5±0 | 3±1 | 4±0 | 4±0 |
| BA.2.12.1 | -4±0 | -4±0 | -6±0 | <NA> | -6±0 | -7±0 | -4±0 | -3±0 | -4±0 | -2±0 | -4±0 | -5±0 | -5±0 | -5±0 | -4±0 | -3±0 | -3±0 | -6±0 | -7±0 | -5±0 | -6±0 | -2±0 | -2±1 | -5±0 | -3±0 | -5±0 | -5±0 | -3±0 |
| BA.2.75 | 4±0 | 3±0 | 1±0 | 5±1 | 2±0 | 4±0 | 3±0 | 4±0 | 3±0 | 4±0 | 4±0 | 3±0 | 2±0 | 3±0 | 4±0 | 1±0 | 3±0 | 2±0 | 4±0 | 3±0 | 1±0 | 2±0 | 0±1 | 4±0 | 5±0 | 3±0 | 3±0 | 3±0 |
| CH.1.1 | 8±0 | 8±0 | 7±1 | 9±1 | 9±0 | 9±0 | 8±0 | 10±0 | 9±0 | 10±0 | 9±0 | 9±0 | 4±0 | 7±1 | 10±0 | 2±0 | 8±0 | 10±1 | 7±0 | 8±0 | 6±0 | 6±0 | 6±1 | 6±0 | 10±0 | 9±0 | 8±0 | 8±0 |
| BN.1 | 5±0 | 5±0 | 3±0 | 9±1 | 5±0 | 4±0 | 5±0 | 6±0 | 6±0 | 9±0 | 6±0 | 5±0 | 4±0 | 3±0 | 5±0 | 2±0 | 6±0 | 4±1 | 5±0 | 6±0 | 4±0 | 4±0 | 2±1 | 5±0 | 6±0 | 5±0 | 5±0 | 5±0 |
| BA.4 | -2±0 | -2±0 | -3±0 | -7±1 | -2±0 | -2±0 | -2±0 | -1±0 | -2±0 | -3±0 | -3±0 | -2±0 | -3±0 | -2±0 | -2±0 | -2±0 | -2±0 | -3±0 | -3±0 | -2±0 | -5±1 | -2±0 | -2±0 | -4±0 | -1±0 | -2±0 | -2±0 | -2±0 |
| BA.4.6 | 1±0 | 1±0 | 0±0 | -8±4 | 1±0 | 2±0 | 1±0 | 2±0 | 2±0 | 3±1 | 2±0 | 2±0 | 1±0 | 1±0 | 2±0 | 0±0 | 2±0 | 0±0 | 1±0 | 1±0 | -1±1 | 1±0 | -1±0 | 0±0 | 2±0 | 1±0 | 1±0 | 1±0 |
| BA.5 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 | 0±0 |
| BA.5.2 | 0±0 | 0±0 | -1±0 | 1±0 | 1±0 | 1±0 | 1±0 | 1±0 | 1±0 | 1±0 | 0±0 | 1±0 | 0±0 | 1±0 | 0±0 | 1±0 | 1±0 | 1±0 | 1±0 | 0±0 | -1±0 | 1±0 | -1±0 | 1±0 | 1±0 | 1±0 | 1±0 | 1±0 |
| BA.5.2.1 | 0±0 | 1±0 | -2±0 | -2±1 | 0±0 | 1±0 | 0±0 | 1±0 | 1±0 | 0±0 | 0±0 | 0±0 | 1±0 | 0±0 | -1±0 | 0±0 | 1±0 | 0±0 | 0±0 | 0±0 | -1±0 | 0±0 | -2±0 | 1±0 | 1±0 | 0±0 | 0±0 | 0±0 |
| BF.7 | 3±0 | 3±0 | 0±0 | -13±7 | 3±0 | 2±0 | 2±0 | 4±0 | 3±0 | 8±1 | 4±1 | 3±0 | 4±0 | 2±0 | 2±0 | 3±0 | 3±0 | 3±0 | 3±0 | 2±0 | 1±0 | 4±0 | 1±0 | 3±0 | 3±0 | 3±0 | 3±0 | 3±0 |
| BA.5.2.6 | 3±0 | 3±0 | -2±1 | 2±1 | 3±0 | 2±1 | 3±0 | 4±0 | 3±0 | 5±1 | 4±0 | 4±0 | 3±0 | 0±1 | 2±0 | 1±0 | 3±0 | 1±1 | 3±0 | 1±1 | 2±0 | 2±0 | -1±0 | 3±0 | 4±0 | 2±0 | 3±0 | 3±0 |
| BA.5.2.13 | 2±0 | 3±0 | <NA> | <NA> | 3±0 | -19±7 | 2±0 | 3±0 | 4±0 | <NA> | <NA> | 3±1 | -16±8 | -1±2 | -17±7 | 1±0 | 3±0 | -1±1 | -7±3 | <NA> | -19±7 | 2±1 | <NA> | -1±1 | 3±1 | 3±0 | 3±0 | 3±0 |
| CK.2.1.1 | 3±1 | 4±0 | -1±2 | <NA> | 5±0 | 5±2 | 3±0 | 5±0 | 3±0 | <NA> | <NA> | 5±0 | 2±1 | 2±1 | <NA> | -8±3 | 4±0 | <NA> | -1±1 | 3±2 | -8±4 | 0±2 | -16±7 | -1±1 | 4±0 | 3±1 | 4±0 | 5±0 |
| BQ.1 | 4±0 | 5±0 | 3±0 | 9±1 | 5±0 | 5±0 | 5±0 | 6±0 | 5±0 | 9±0 | 6±0 | 5±0 | 4±0 | 4±0 | 3±0 | 2±0 | 5±0 | 6±0 | 5±0 | 5±0 | 4±0 | 4±0 | 2±0 | 5±0 | 6±0 | 5±0 | 4±0 | 5±0 |
| BQ.1.1 | 5±0 | 5±0 | 3±0 | 10±1 | 6±0 | 7±0 | 5±0 | 6±0 | 6±0 | 10±0 | 8±0 | 6±0 | 4±0 | 5±0 | 4±0 | 2±0 | 6±0 | 6±0 | 5±0 | 6±0 | 3±0 | 4±0 | 4±0 | 4±0 | 6±0 | 6±0 | 6±0 | 6±0 |
| BQ.1.1.20 | -14±8 | 6±1 | <NA> | <NA> | -6±4 | <NA> | 6±0 | 7±1 | 7±0 | <NA> | <NA> | -15±7 | <NA> | <NA> | <NA> | <NA> | 7±1 | <NA> | <NA> | <NA> | <NA> | <NA> | <NA> | -16±8 | -9±7 | 7±0 | 7±1 | 8±1 |
| BQ.1.9 | <NA> | <NA> | <NA> | <NA> | 6±1 | <NA> | <NA> | <NA> | <NA> | 7±2 | -9±5 | <NA> | -12±5 | <NA> | <NA> | <NA> | -10±5 | <NA> | <NA> | -10±5 | <NA> | <NA> | <NA> | -8±4 | <NA> | <NA> | 6±0 | <NA> |
| XBB | 7±0 | 5±0 | 6±0 | 8±1 | 6±0 | 7±0 | 6±0 | 7±0 | 6±0 | 11±0 | 7±0 | 6±0 | 6±0 | 7±1 | 7±0 | 1±0 | 6±0 | 8±1 | 6±0 | 7±0 | 6±0 | 7±0 | 5±0 | 7±0 | 8±0 | 6±0 | 6±0 | 6±0 |
| XBB.1 | 5±0 | 5±0 | 8±0 | 11±1 | 7±0 | 8±0 | 5±0 | 8±0 | 6±0 | 10±0 | 8±0 | 7±0 | 3±0 | 8±0 | 9±0 | 2±0 | 7±0 | 6±0 | 5±0 | 7±0 | 6±0 | 3±0 | 7±1 | 5±0 | 9±0 | 6±0 | 7±0 | 7±0 |
| XBB.1.5 | 10±0 | 11±0 | 9±0 | 17±1 | 11±0 | 13±0 | 12±0 | 12±0 | 11±0 | 12±0 | 11±0 | 11±0 | 10±0 | 13±0 | 13±0 | 7±0 | 11±0 | 14±0 | 10±0 | 12±0 | 10±0 | 8±0 | 11±0 | 10±0 | 12±0 | 12±0 | 11±0 | 12±0 |
| XBB.1.9.1 | 11±0 | 13±0 | 8±3 | 17±1 | 13±0 | 14±2 | 13±0 | 14±0 | 13±0 | 12±0 | 13±0 | 14±0 | 12±0 | 14±2 | 13±0 | 7±0 | 13±0 | 16±3 | 12±1 | 5±2 | 12±0 | 8±0 | 15±1 | 12±0 | 15±0 | 13±0 | 13±0 | 13±0 |
| XBB.1.9.2 | 12±0 | 12±0 | 13±2 | 18±1 | 14±0 | 15±2 | 12±0 | 14±0 | 13±0 | 11±1 | 14±0 | 14±0 | 11±0 | <NA> | 14±1 | 6±0 | 14±0 | 16±3 | 11±1 | 6±2 | 11±1 | 8±0 | 14±2 | 13±0 | 14±0 | 14±0 | 14±0 | 14±0 |
| XBB.1.11.1 | 10±1 | 12±2 | <NA> | 16±1 | 12±2 | <NA> | <NA> | 11±1 | 6±2 | 9±1 | 12±0 | 12±2 | 8±1 | <NA> | 11±4 | 5±0 | 12±1 | <NA> | -9±8 | <NA> | -6±6 | 9±0 | <NA> | 13±1 | 4±4 | 12±2 | 12±1 | 12±1 |
| XBB.1.16 | 14±0 | 17±1 | 0±7 | 18±1 | 17±0 | 12±4 | 17±1 | 17±1 | 17±1 | 16±0 | 16±1 | 18±1 | 13±0 | -4±8 | 20±1 | 11±0 | 17±1 | 10±7 | 14±1 | -9±7 | 2±5 | 11±0 | 15±3 | 16±1 | 18±1 | 16±1 | 17±0 | 17±0 |
| XBF | 6±0 | 8±0 | -9±6 | 9±1 | 8±0 | 3±3 | 8±0 | 10±0 | 9±0 | 10±0 | 2±3 | 9±0 | 4±0 | 7±2 | 5±1 | 3±0 | 9±0 | -15±8 | 6±0 | <NA> | <NA> | 5±0 | 1±2 | 6±0 | 9±0 | 8±0 | 8±0 | 8±0 |
Shown is the daily growth advantage over BA.5 in percent. Errors are standard errors.
The variant share is extrapolated from the last day with observed data. In countries where a variant hasn't been detected yet, it is assumed to be introduced at levels of 1% of the international average.
Latest estimated variant proportion.
| Australia | Austria | Brazil | Brunei | Canada | Chile | Denmark | France | Germany | India | Indonesia | Israel | Japan | Mexico | Russia | Singapore | South Africa | South Korea | Spain | Sweden | USA | United Kingdom | Other - Africa | Other - Asia | Other - Europe | Other - North America | Other - Oceania | Other - South America | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| B.1.1.529 | 0.0 | 0.0 | 0.0 | (0.0) | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| BA.1 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| BA.1.1 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| BA.2 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| BA.2.3.20 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.1 | 0.0 | 0.0 | 0.0 | 0.0 |
| BA.2.12.1 | 0.0 | 0.0 | 0.0 | (0.0) | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| BA.2.75 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.1 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.1 | 0.0 | 0.0 | 0.1 | 0.0 |
| CH.1.1 | 2.4 | 0.8 | 0.2 | 0.0 | 0.7 | 0.1 | 3.0 | 0.9 | 2.0 | 0.0 | 0.2 | 0.1 | 0.1 | 0.0 | 0.2 | 1.0 | 0.0 | 0.4 | 1.1 | 2.1 | 0.1 | 1.6 | 0.4 | 0.2 | 1.2 | 0.1 | 3.4 | 0.5 |
| BN.1 | 0.1 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.1 | 0.0 | 0.1 | 0.0 | 0.0 | 0.0 | 0.8 | 0.0 | 0.0 | 0.2 | 0.0 | 2.8 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.8 | 0.0 | 0.0 | 0.1 | 0.0 |
| BA.4 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| BA.4.6 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| BA.5 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| BA.5.2 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.6 | 0.0 | 0.0 | 0.0 | 0.0 |
| BA.5.2.1 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| BF.7 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.7 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 5.9 | 0.0 | 0.0 | 0.0 | 0.0 |
| BA.5.2.6 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.1 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| BA.5.2.13 | 0.0 | 0.0 | (0.0) | (0.0) | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | (0.0) | (0.0) | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | (0.0) | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | (0.0) |
| CK.2.1.1 | 0.0 | 0.0 | 0.0 | (0.0) | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | (0.0) | (0.0) | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | (0.0) | 0.0 | 0.0 | (0.0) | 0.0 | 0.0 |
| BQ.1 | 0.0 | 0.0 | 0.0 | 0.0 | 0.1 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.2 | 0.0 | 0.0 | 0.1 | 0.0 | 0.5 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.1 | 0.0 | 0.0 | 0.1 | 0.0 |
| BQ.1.1 | 0.1 | 0.1 | 0.3 | 0.0 | 0.5 | 0.1 | 0.1 | 0.2 | 0.2 | 0.0 | 0.1 | 0.0 | 0.5 | 0.0 | 0.0 | 0.1 | 0.0 | 0.1 | 0.3 | 0.1 | 0.1 | 0.1 | 0.0 | 0.1 | 0.2 | 0.0 | 0.1 | 0.2 |
| BQ.1.1.20 | 0.0 | 0.0 | (0.0) | (0.0) | 0.0 | (0.0) | 0.1 | 0.0 | 0.0 | (0.0) | (0.0) | 0.0 | (0.0) | (0.0) | (0.0) | (0.0) | (0.0) | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | (0.0) | (0.0) | 0.0 | (0.0) | (0.0) | (0.0) |
| BQ.1.9 | (0.0) | (0.0) | (0.0) | (0.0) | 0.0 | (0.0) | (0.0) | (0.0) | (0.0) | 0.0 | 0.0 | (0.0) | 0.0 | (0.0) | (0.0) | (0.0) | (0.0) | 0.0 | (0.0) | (0.0) | 0.0 | (0.0) | (0.0) | (0.0) | 0.0 | (0.0) | (0.0) | 0.0 |
| XBB | 0.2 | 0.0 | 0.2 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.2 | 0.0 | 0.0 | 0.2 | 0.0 | 0.4 | 9.3 | 0.0 | 0.2 | 0.1 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.1 | 1.1 |
| XBB.1 | 0.0 | 0.0 | 15.4 | 0.1 | 0.1 | 0.1 | 0.0 | 0.1 | 0.0 | 0.1 | 0.9 | 0.0 | 0.0 | 0.1 | 1.2 | 0.1 | 0.1 | 0.0 | 0.2 | 0.0 | 0.0 | 0.0 | 0.3 | 0.4 | 0.1 | 0.0 | 0.0 | 0.4 |
| XBB.1.5 | 22.8 | 46.3 | 72.4 | 3.7 | 51.3 | 93.9 | 53.0 | 40.5 | 50.7 | 1.0 | 1.4 | 16.4 | 20.3 | 96.9 | 7.1 | 10.7 | 41.5 | 16.5 | 50.9 | 48.2 | 55.9 | 40.1 | 22.0 | 13.1 | 38.4 | 89.4 | 38.7 | 97.7 |
| XBB.1.9.1 | 17.0 | 15.3 | 1.3 | 17.0 | 9.2 | 2.2 | 22.3 | 29.5 | 25.4 | 0.3 | 23.8 | 19.2 | 24.1 | 2.8 | 89.1 | 13.3 | 46.6 | 17.3 | 27.5 | 16.9 | 7.2 | 28.4 | 9.6 | 18.1 | 25.9 | 4.6 | 14.2 | 0.0 |
| XBB.1.9.2 | 19.9 | 18.3 | 9.2 | 37.0 | 3.8 | 2.5 | 10.4 | 21.3 | 13.7 | 0.1 | 59.0 | 20.3 | 8.7 | (0.1) | 2.1 | 5.6 | 5.0 | 23.3 | 12.0 | 13.9 | 4.6 | 10.6 | 2.4 | 3.8 | 21.5 | 4.6 | 7.0 | 0.0 |
| XBB.1.11.1 | 0.3 | 0.1 | (0.0) | 9.3 | 0.2 | (0.0) | (0.0) | 0.0 | 0.0 | 0.0 | 2.0 | 0.3 | 0.2 | (0.0) | 0.0 | 6.9 | (0.0) | 1.2 | 0.0 | 0.4 | 0.0 | 0.1 | 0.6 | 0.4 | 0.1 | (0.0) | 0.0 | (0.0) |
| XBB.1.16 | 36.2 | 18.7 | 1.1 | 32.8 | 34.1 | 1.1 | 10.6 | 7.3 | 7.6 | 97.3 | 11.6 | 43.6 | 44.1 | 0.0 | 0.0 | 52.4 | 6.8 | 37.5 | 7.9 | 17.9 | 32.0 | 18.9 | 64.7 | 55.3 | 12.3 | 1.2 | 35.5 | 0.0 |
| XBF | 0.9 | 0.3 | 0.0 | 0.0 | 0.1 | 0.0 | 0.3 | 0.1 | 0.2 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | (0.0) | 0.2 | 0.0 | 0.1 | 0.1 | 0.3 | 0.0 | 0.1 | 0.0 | 0.0 | 0.2 | 0.0 | 0.7 | (0.0) |
Shown is the estimated variant proportion on 2023-05-19 in percent.
Values in parentheses mean that the variant has not been detected in the specific country and are imputed instead.