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84 Open 48 Closed
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Issues list

In batch mode, check if urls point to valid files in the batch job itself instead of the subjobs bug Something isn't working
#140 opened Feb 5, 2025 by pbordron
@pbordron
Add buttons to flip vertically and horizontally the dot plot
#139 opened Jan 23, 2025 by chklopp
Html interface must reflect extensions defined in allowed_extensions.yml
#138 opened Jan 21, 2025 by pbordron
User define extensions are overrided by default ones.
#137 opened Jan 21, 2025 by pbordron
Add fsa and fsa.gz file types to the upload possible formats
#136 opened Jan 21, 2025 by chklopp
Disambiguate Strand column in alignment table file doc Documentation to_discuss Something that may be included in a milestone
#135 opened Jan 16, 2025 by pbordron
Add AUTHOR file
#133 opened Jan 3, 2025 by pbordron
Navigating in the dot plot using a list of contig pairs
#132 opened Nov 14, 2024 by chklopp
Extract contig duplication from the self alignment map
#131 opened Nov 14, 2024 by chklopp
Add way to copy the alignment coordinates shown with mouse over
#130 opened Nov 12, 2024 by chklopp
Gunicorn fails to free memory when a worker crashes
#129 opened Nov 12, 2024 by pbordron
@pbordron
UX design enhancement New feature or request to_discuss Something that may be included in a milestone
#128 opened Oct 29, 2024 by pbordron
query assembled as reference not gzipped
#126 opened Apr 22, 2024 by chklopp
Add dgenies version on web interface and inside logs
#125 opened Mar 11, 2024 by pbordron 1.6 (dotplot annotations)
@pbordron
Length of job name > 50 bug Something isn't working
#124 opened Feb 19, 2024 by pbordron 1.6 (dotplot annotations)
@pbordron
Different size limit for plot job enhancement New feature or request
#123 opened Jan 30, 2024 by pbordron
@pbordron
PyPi release does not support Flask >= 3 bug Something isn't working dependencies Pull requests that update a dependency file
#122 opened Jan 29, 2024 by Adamtaranto
2
Allows dgenies-scheduler to keep going even if cluster is not reachable. low priority Long term evolution to_discuss Something that may be included in a milestone
#121 opened Jan 23, 2024 by pbordron
feat: submit file cleanning as cluster job
#120 opened Jan 11, 2024 by pbordron
Unkown DRMAA error
#119 opened Jan 9, 2024 by pbordron
Dgenies Stuck when network fails / scheduler restart
#118 opened Jan 9, 2024 by pbordron
2
trouble uploading target/query files
#117 opened Jan 4, 2024 by jasonwjohns
12
Add a simple way to get current and pending uploads
#116 opened Nov 24, 2023 by pbordron
Produce a clean message when upload timeout is reached
#114 opened Nov 24, 2023 by pbordron
Update included version of minimap2 to v2.26
#113 opened Nov 23, 2023 by pbordron
ProTip! no:milestone will show everything without a milestone.