Add refpanel option to limit allowed allele switches #132
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Codecov ReportAll modified and coverable lines are covered by tests ✅
Additional details and impacted files@@ Coverage Diff @@
## master #132 +/- ##
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+ Coverage 51.70% 52.15% +0.44%
- Complexity 681 691 +10
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Files 59 59
Lines 4526 4533 +7
Branches 568 569 +1
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+ Hits 2340 2364 +24
+ Misses 2008 1996 -12
+ Partials 178 173 -5 ☔ View full report in Codecov by Sentry. |
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This pull request allows to specify the allowed allele switches for each reference panel.
By default, no allele switches limit is defined. The MAX number of allowed allele switches can be specified as follows in the reference panel YAML file.