Code

Improve format of output files#7

Code

Merged

lukfor merged 15 commits intomaingenepi/imputationserver-utils:mainfrom features/output-filesgenepi/imputationserver-utils:features/output-filesCopy head branch name to clipboardJul 29, 2024

+451-304

Commits

Commits on Jul 24, 2024

• Switch to different output format

  lukfor

  committed
  5026140

• Cleanup maven dependencies

  lukfor

  committed
  a1d3ba3

• Revert htsjdk version to 3.0.5

  lukfor

  committed
  1de0444

• Remove panels.yaml and use json

  lukfor

  committed
  a084bac

• Update counters

  lukfor

  committed
  3da72dd

• Add simple script to convert existing legend files

  lukfor

  committed
  89e4823

Commits on Jul 25, 2024

• Update reference sites format

  lukfor

  committed
  553adda

• Simplify writing files

  lukfor

  committed
  d9fd320

Commits on Jul 26, 2024

• Remove tabix and update output writer

  lukfor

  committed
  8faac81

• Fix issue in exception handling of tabix index creation

  lukfor

  committed
  96791a3

• Add hg38 testcases

  seppinho

  committed
  ff4b437

• Fix issue with chromosome for tabix

  seppinho

  committed
  7a662ff

Commits on Jul 29, 2024

• Merge branch 'main' into features/output-files

  lukfor

  authored
  38ce50c

• Fix merge errors

  lukfor

  committed
  4b0d191

• Update chunks writer

  lukfor

  committed
  3b73ee2