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# Wally web application | ||
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[Wally](https://github.com/tobiasrausch/wally) is a command-line application to plot aligned sequencing reads. This is the web frontend of wally. It can be run online as a web application at [https://www.gear-genomics.com/wally](https://www.gear-genomics.com/wally). | ||
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## Citation | ||
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[Wally](https://github.com/tobiasrausch/wally) was original developed to visualize complex genomic rearrangements in cancer. | ||
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Tobias Rausch, Rene Snajder, Adrien Leger, Milena Simovic, Mădălina Giurgiu, Laura Villacorta, Anton G. Henssen, Stefan Fröhling, Oliver Stegle, Ewan Birney, Marc Jan Bonder, Aurelie Ernst, Jan O. Korbel | ||
Long-read sequencing of diagnosis and post-therapy medulloblastoma reveals complex rearrangement patterns and epigenetic signatures | ||
Cell Genomics, 2023, 100281, [DOI: 10.1016/j.xgen.2023.100281](https://doi.org/10.1016/j.xgen.2023.100281) | ||
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