Preliminary fix for assemble-turnstile-data.yml workflow #983
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
I just tested the RACK Build Virtual Machine Workflow. It failed while trying to assemble the Turnstile ingestion package:
Someone moved the GE-Ontology directory into the overlays directory a while ago, but did not update the Turnstile instructions. This pull request fixes the location of the GE-Ontology directory in Turnstile-Example/Assemble-TurnstileData.sh, but I need someone else to update the Turnstile instructions. RACK has changed the method used to ingest ingestion packages; the new method now uses the rack-ui interface instead of shell scripts or the rack CLI. Some of the shell scripts mentioned in the instructions don't exist anymore. If we still need to assemble the Turnstile ingestion package and tell users how to ingest it, will someone please modify this pull request to update these README files with the correct instructions too?