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clinker v0.0.23
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@gamcil gamcil released this 26 Oct 07:05
· 39 commits to master since this release
v0.0.23
ae99ec5
  • Added -gf/--gene_functions argument for grouping genes by shared function/category, instead of just sequence similarity.

Given a 2-column CSV resembling:

GENE_001,Cytochrome P450 
GENE_002,Cytochrome P450 
GENE_003,Methyltransferase
GENE_004,Methyltransferase

Two groups are generated, Cytochrome P450 (GENE_001 and 002), and Methyltransferase (GENE_003, GENE_004).

  • Updated clustermap.js. Gene groups now have tooltips when the corresponding label in the legend is right-clicked, and can now be easily merged to combine groups that share some function/category that did not group together by similarity alone
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