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Pull requests: galaxyproject/tools-iuc

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Pull requests list

Update data_manager_hisat2_index_builder for normalized layout, plus:
#6939 opened Apr 25, 2025 by natefoo Loading…
3 of 5 tasks
Updating minimap2 to latest version and adding a new preset option
#6937 opened Apr 25, 2025 by SaimMomin12 • Draft
3 of 5 tasks
Updating tools/squirrel from version 1.0.13 to 1.1.2
#6930 opened Apr 21, 2025 by gxydevbot Loading…
1
Updating tools/minimap2 from version 2.28 to 2.29
#6928 opened Apr 21, 2025 by gxydevbot Loading…
@SaimMomin12
2
Added seaborn plotting suite
#6922 opened Apr 17, 2025 by hechth Loading…
3 tasks done
28
Copied upsetR tool over from rcx
#6921 opened Apr 17, 2025 by hechth Loading…
3 tasks done
9
Updating tools/isescan from version 1.7.2.3 to 1.7.3
#6915 opened Apr 14, 2025 by gxydevbot Loading…
Updating tools/datamash from version 1.8 to 1.9
#6912 opened Apr 14, 2025 by gxydevbot Loading…
Vpt
#6904 opened Apr 7, 2025 by nilchia • Draft
3 of 5 tasks
3
Updating tools/ncbi_datasets from version 17.1.0 to 18.0.2
#6894 opened Mar 31, 2025 by gxydevbot Loading…
2
update version omamer
#6879 opened Mar 25, 2025 by rlibouba • Draft
oatk_tool
#6868 opened Mar 20, 2025 by Deeptivarshney • Draft
3 of 5 tasks
Bump maker
#6862 opened Mar 18, 2025 by bernt-matthias Loading…
3 of 5 tasks
3
Update CheckM2 DM from 1.0.2 to 1.1.0 and revert DM workaround
#6861 opened Mar 18, 2025 by SantaMcCloud Loading…
2 of 5 tasks
6
Adapted MaAsLin2 for workflow use
#6858 opened Mar 17, 2025 by SantaMcCloud Loading…
2 of 5 tasks
14
Adapted MMUPHin for workflow use
#6857 opened Mar 17, 2025 by SantaMcCloud Loading…
2 of 5 tasks
4
Updating tools/compleasm from version 0.2.6 to 0.2.7
#6848 opened Mar 17, 2025 by gxydevbot Loading…
2
Updating tools/autobigs from version 0.6.2 to 0.6.5
#6846 opened Mar 17, 2025 by gxydevbot Loading…
2
WIP repeatmasker: bump and dfam data table
#6845 opened Mar 15, 2025 by bernt-matthias • Draft
3 of 6 tasks
Bump augustus
#6842 opened Mar 14, 2025 by bernt-matthias Loading…
3 of 5 tasks
3
Update SemiBin DM
#6817 opened Mar 5, 2025 by SantaMcCloud Loading…
2 of 5 tasks
11
Updated autoBIGS tool to support Galaxy 20.01
#6815 opened Mar 5, 2025 by RealYHD Loading…
3 of 5 tasks
18
The data_manager_wordcloud folder was updated
#6813 opened Mar 5, 2025 by reytakop Loading…
Add ENA Webin cli as a Galaxy tool
#6807 opened Feb 27, 2025 by bedroesb • Draft
7 of 17 tasks
3
Fixes tests from tools/artic
#6800 opened Feb 25, 2025 by SaimMomin12 Loading…
3 of 5 tasks
5
ProTip! Exclude everything labeled bug with -label:bug.