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Describe the bug If you upgrade a workflow in UI or with planemo, if the tool you are upgrading has a 'when' then the 'when' input is disconnected
Galaxy Version and/or server at which you observed the bug Galaxy Version: 24.1, 24.0 etc... On usegalaxy.org, usegalaxy.eu, planemo etc...
Browser and Operating System Operating System: Linux Browser: Firefox
To Reproduce Steps to reproduce the behavior: 1.Make a minimal workflow like with a tool with a not last version tool with a when:
{ "a_galaxy_workflow": "true", "annotation": "", "comments": [], "format-version": "0.1", "name": "Minimal workflow", "steps": { "0": { "annotation": "", "content_id": null, "errors": null, "id": 0, "input_connections": {}, "inputs": [ { "description": "", "name": "run head" } ], "label": "run head", "name": "Input parameter", "outputs": [], "position": { "left": 0.0, "top": 0.0 }, "tool_id": null, "tool_state": "{\"parameter_type\": \"boolean\", \"optional\": false}", "tool_version": null, "type": "parameter_input", "uuid": "920c0880-4f35-4fe1-b1d3-e5da3502e51b", "when": null, "workflow_outputs": [] }, "1": { "annotation": "", "content_id": null, "errors": null, "id": 1, "input_connections": {}, "inputs": [ { "description": "", "name": "input text" } ], "label": "input text", "name": "Input dataset", "outputs": [], "position": { "left": 113.00000000000006, "top": 96.04206350578201 }, "tool_id": null, "tool_state": "{\"optional\": false, \"tag\": null}", "tool_version": null, "type": "data_input", "uuid": "b5346c7e-3d1c-45ab-a65f-cc1a2a44e3dc", "when": null, "workflow_outputs": [] }, "2": { "annotation": "", "content_id": "toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_head_tool/1.1.0", "errors": null, "id": 2, "input_connections": { "infile": { "id": 1, "output_name": "output" }, "when": { "id": 0, "output_name": "output" } }, "inputs": [ { "description": "runtime parameter for tool Select first", "name": "infile" } ], "label": "get first 10 lines", "name": "Select first", "outputs": [ { "name": "outfile", "type": "input" } ], "position": { "left": 484.56665039062534, "top": 143.74846045400975 }, "post_job_actions": {}, "tool_id": "toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_head_tool/1.1.0", "tool_shed_repository": { "changeset_revision": "ddf54b12c295", "name": "text_processing", "owner": "bgruening", "tool_shed": "toolshed.g2.bx.psu.edu" }, "tool_state": "{\"complement\": \"\", \"count\": \"10\", \"infile\": {\"__class__\": \"RuntimeValue\"}, \"__page__\": null, \"__rerun_remap_job_id__\": null}", "tool_version": "1.1.0", "type": "tool", "uuid": "fc693bb3-7e0c-4e9f-8a4d-4fbdb5ffdd16", "when": "$(inputs.when)", "workflow_outputs": [ { "label": "outfile", "output_name": "outfile", "uuid": "0401547e-1c8f-4dbe-924d-7eba864a13ff" } ] } }, "tags": [], "uuid": "5e4c9d3c-69f2-45bf-89ce-1e0a37ffd99f", "version": 3 }
Expected behavior An upgrade of the tool keeping the when.
Screenshots
The text was updated successfully, but these errors were encountered:
Fix dropped when_expression on workflow/tool_upgrade
69ffd24
Fixes galaxyproject#18441
ed8dc4b
Thanks @mvdbeek
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Describe the bug
If you upgrade a workflow in UI or with planemo, if the tool you are upgrading has a 'when' then the 'when' input is disconnected
Galaxy Version and/or server at which you observed the bug
Galaxy Version: 24.1, 24.0 etc...
On usegalaxy.org, usegalaxy.eu, planemo etc...
Browser and Operating System
Operating System: Linux
Browser: Firefox
To Reproduce
Steps to reproduce the behavior:
1.Make a minimal workflow like with a tool with a not last version tool with a when:
Expected behavior
An upgrade of the tool keeping the when.
Screenshots

The text was updated successfully, but these errors were encountered: