Update src/main/scala/com/fulcrumgenomics/bam/SortBam.scala

Co-authored-by: Matt Stone <matthew.stone12@gmail.com>
fulcrumgenomics · May 30, 2024 · 0c13e84 · 0c13e84
1 parent aec90c7
commit 0c13e84
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/src/main/scala/com/fulcrumgenomics/bam/SortBam.scala b/src/main/scala/com/fulcrumgenomics/bam/SortBam.scala
@@ -41,7 +41,7 @@ import com.fulcrumgenomics.util.Io
     |and several
     |4. **RandomQuery**: sorts the reads into a random order but keeps reads with the same
     |   queryname together. The ordering is deterministic for any given input.
-    |5. **TemplateCoordinate**: sorts the reads The sort order used by `GroupReadByUmi`. Sorts reads by
+    |5. **TemplateCoordinate**: The sort order used by `GroupReadByUmi`. Sorts reads by
     |   the earlier unclipped 5' coordinate of the read pair, the higher unclipped 5' coordinate of the
     |   read pair, library, the molecular identifier (MI tag), read name, and if R1 has the lower 
     |   coordinates of the pair.