2.2.0

New parameters:

• ashleys_pipeline_only: target ashleys_pipeline output files to do manual selection afterwards ; liimit to the use of mosaicatcher-pipeline repo exclusively
• blacklist_regions: enable/disable blacklisting of regions

Bug fixes

• filter_bad_cells update and fix
• BAM SM tag check (counts.smk)
• fix of ms norm in mosaicatcher without using ashleys module
• scNOVA fix (slurm related)
• arbigent: create_hdf.py fix
• Fixing small indexing errors in plot-sv-calls_dev by @p-smirnov in #41

New Contributors

• @p-smirnov made their first contribution in #41

Full Changelog: 2.1.3...2.2.0