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Model import
jo edited this page May 22, 2019
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- import of matlab cobra models is possible in bacarena
- tutorial
readMATmod("cobra-model.mat")- sybilSBML is needed for SBML input
- currently sybilSBML is not available on CRAN because the CRAN test servers do not have the latest version of libsbml yet
- manual installation of sybilSBML (for linux):
wget https://www.cs.hhu.de/fileadmin/redaktion/Oeffentliche_Medien/Fakultaeten/Mathematisch-Naturwissenschaftliche_Fakultaet/Informatik/Bioinformatik/sybilSBML_3.0.5.tar.gz
R CMD INSTALL sybilSBML_3.0.5.tar.gz