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Move peripherals to new mcu-gen configuration script #605

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Moves the configuration of peripherals into the new mcu-gen system.

  • Fix items in TODO_PR.md
  • Test make mcu-gen X_HEEP_CFG=configs/example.py && make verilator-sim

Based on and replaces #511

Still not working. The items in TODO_PR.md must be fixed.
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