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@epiverse-trace

Epiverse-TRACE

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  1. epiparameter epiparameter Public

    R package with library of epidemiological parameters for infectious diseases and functions and classes for working with parameters

    R 32 11

  2. sivirep sivirep Public

    Data Wrangling and Automated Reports from 'SIVIGILA' source

    R 29 3

  3. serofoi serofoi Public

    Estimates the Force-of-Infection of a given pathogen from population based sero-prevalence studies

    R 17 4

  4. vaccineff vaccineff Public

    R package with tools for estimating vaccine effectiveness and vaccine related metrics

    R 14 2

  5. cfr cfr Public

    R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series

    R 13 3

  6. finalsize finalsize Public

    R package to calculate the final size of an SIR epidemic in populations with heterogeneity in social contacts and disease susceptibility

    R 11 7

Repositories

Showing 10 of 58 repositories
  • epiverse-trace.github.io Public

    Technical blog of the Epiverse-TRACE project, where we share opinions and investigations in R package development, or scientific software development more generally

    epiverse-trace/epiverse-trace.github.io’s past year of commit activity
    R 3 3 10 (2 issues need help) 3 Updated Oct 14, 2024
  • epinetwork Public Forked from biouea/covidhm

    Modelling transmission on real-world social networks

    epiverse-trace/epinetwork’s past year of commit activity
    R 1 7 0 0 Updated Oct 14, 2024
  • etstats Public
    epiverse-trace/etstats’s past year of commit activity
    R 2 CC0-1.0 0 2 0 Updated Oct 14, 2024
  • .github Public
    epiverse-trace/.github’s past year of commit activity
    1 1 4 0 Updated Oct 14, 2024
  • vaccineff Public

    R package with tools for estimating vaccine effectiveness and vaccine related metrics

    epiverse-trace/vaccineff’s past year of commit activity
    R 14 2 12 1 Updated Oct 12, 2024
  • epitkit Public
    epiverse-trace/epitkit’s past year of commit activity
    R 0 0 4 1 Updated Oct 11, 2024
  • cfr Public

    R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series

    epiverse-trace/cfr’s past year of commit activity
    R 13 3 11 3 Updated Oct 11, 2024
  • howto Public
    epiverse-trace/howto’s past year of commit activity
    R 1 CC-BY-4.0 2 62 0 Updated Oct 11, 2024
  • tutorials-late Public
    epiverse-trace/tutorials-late’s past year of commit activity
    R 2 1 27 5 Updated Oct 11, 2024
  • shinyapps-tracelac Public
    epiverse-trace/shinyapps-tracelac’s past year of commit activity
    R 1 0 0 0 Updated Oct 10, 2024
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