Wittigue patch 2

.github/workflows/jekyll.yml

@@ -55,10 +55,12 @@ jobs:
           JEKYLL_BUILD_BRANCH: ${{ github.ref_name }}
           JEKYLL_ENV: ${{ steps.name.outputs.jekyll_env }}
           JEKYLL_GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+          JEKYLL_BASE_PATH: ${{ steps.pages.outputs.base_path }}
 
       - name: Upload artifact
         uses: actions/upload-pages-artifact@v1
 
+
   deploy:
     runs-on: ubuntu-latest
     needs: build

.github/workflows/tool_list_conversion.yml

@@ -22,10 +22,10 @@ jobs:
       - name: Install dependencies
         run: |
           python -m pip install --upgrade pip
-          pip install pyyaml requests python-frontmatter
+          pip install ruamel.yaml requests python-frontmatter
       - name: Run tool table 2 yaml
         run: | 
-          python var/conversions.py
+          python var/tools_validator.py
 
   registry-lookup:
     if: |
@@ -49,11 +49,11 @@ jobs:
       - name: Install dependencies
         run: |
           python -m pip install --upgrade pip
-          pip install pyyaml requests python-frontmatter
+          pip install ruamel.yaml requests python-frontmatter
 
-      - name: Run tool table 2 yaml
+      - name: Run regsitry lookup for the tools file
         run: | 
-          python var/conversions.py --reg --username ${{ secrets.FAIRSHARING_USERNAME }} --password "${{ secrets.FAIRSHARING_PASSWORD }}"
+          python var/tools_validator.py --reg --username ${{ secrets.FAIRSHARING_USERNAME }} --password "${{ secrets.FAIRSHARING_PASSWORD }}"
 
       - name: Fetch country names with corresponding iso
         run: |

Gemfile

@@ -1,8 +1,17 @@
 source "https://rubygems.org"
 
-# GitHub pages dependencies
-gem 'github-pages', group: :jekyll_plugins
+gem "elixir-toolkit-theme-plugins", "~> 0.1.7"
+gem "webrick", "~> 1.7"
+gem "jekyll", "~> 4.3.1"
+gem "jemoji", "~> 0.13.0"
+gem "kramdown-parser-gfm", "~> 1.1"
 
-# Webrick needed for Ruby v3.0+ compatibility
-gem "webrick"
+group :jekyll_plugins do
+  gem "jekyll-redirect-from", "~> 0.16.0"
+  gem "jekyll-sitemap", "~> 1.4"
+  gem "jekyll-github-metadata", "~> 2.15"
+  gem "jekyll-relative-links", "~> 0.6"
+  gem "jekyll-seo-tag", "~> 2.8"
+  gem "jekyll-remote-theme"
+end
 

_config.yml

@@ -4,7 +4,7 @@ title: RDMkit
 description: "Best practices and guidelines you can use for FAIR management of your research data."
 # Metadata description of the website
 
-remote_theme: ELIXIR-Belgium/elixir-toolkit-theme@1.26.0
+remote_theme: ELIXIR-Belgium/elixir-toolkit-theme@2.0.0
 
 sass:
   style: compressed
@@ -136,6 +136,8 @@ defaults:
       sidebar: about
 
 plugins:
+  - elixir-toolkit-theme-plugins
   - jemoji
   - jekyll-redirect-from
   - jekyll-sitemap
+  - jekyll-github-metadata