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Replace EngineClosedException with AlreadyClosedExcpetion (#22631)
`EngineClosedException` is a ES level exception that is used to indicate that the engine is closed when operation starts. It doesn't really add much value and we can use `AlreadyClosedException` from Lucene (which may already bubble if things go wrong during operations). Having two exception can just add confusion and lead to bugs, like wrong handling of `EngineClosedException` when dealing with document level failures. The latter was exposed by `IndexWithShadowReplicasIT`. This PR also removes the AwaitFix from the `IndexWithShadowReplicasIT` tests (which was what cause this to be discovered). While debugging the source of the issue I found some mismatches in document uid management in the tests. The term that was passed to the engine didn't correspond to the uid in the parsed doc - those are fixed as well.
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