fix bugs

Project.toml

@@ -1,4 +1,4 @@
-name = "Curvefit"
+name = "VegCurveFit"
 uuid = "dec11fe7-d51b-4c55-8237-c7557eff4313"
 authors = ["Dongdong Kong"]
 version = "0.1.0"

docs/make.jl

@@ -1,17 +1,28 @@
-using Documenter, nlminb
+using Documenter, VegCurveFit
+CI = get(ENV, "CI", nothing) == "true"
 
-makedocs(;
-    modules=[nlminb],
-    format=Documenter.HTML(),
-    pages=[
-        "Home" => "index.md",
-    ],
-    repo="https://kongdd/kongdd/nlminb.jl/blob/{commit}{path}#L{line}",
-    sitename="nlminb.jl",
-    authors="Dongdong Kong",
-    assets=String[],
+# Logging.disable_logging(Logging.Warn)
+
+# Make the docs, without running the tests again
+# We need to explicitly add all the extensions here
+makedocs(
+  modules=[
+    VegCurveFit
+  ],
+  format=Documenter.HTML(
+    prettyurls=CI,
+  ),
+  pages=[
+    "Home" => "index.md",
+  ],
+  sitename="VegCurveFit.jl",
+  warnonly=true,
+  clean=false,
 )
 
-deploydocs(;
-    repo="kongdd/kongdd/nlminb.jl",
+# Enable logging to console again
+# Logging.disable_logging(Logging.BelowMinLevel)
+
+deploydocs(
+  repo="github.com/eco-hydro/VegCurveFit.jl.git",
 )

docs/src/index.md

@@ -1,8 +1,5 @@
-# nlminb.jl
+# VegCurveFit.jl
 
-```@index
-```
-
-```@autodocs
-Modules = [nlminb]
+```docs
+nlminb
 ```

src/CurveFit/CurveFit.jl

@@ -28,7 +28,7 @@ FUNCS_doubleLog = Dict(
 )
 
 
-function curvefits(y::AbstractArray{T,1}, t, w::::AbstractArray{T,1},
+function curvefits(y::AbstractArray{T,1}, t, w::AbstractArray{T,1},
   ylu::Vector{Float64}, nptperyear::Integer,
   dt;
   methods=["AG", "Zhang", "Beck", "Elmore"]) where {T<:Real}

test/runtests.jl

@@ -1,7 +1,7 @@
-using nlminb
 using Test
+using VegCurveFit
 
-@testset "nlminb.jl" begin
+@testset "nlminb" begin
   # Write your own tests here.
   start = [0.0] # [1, 2, 3, 4]
   lower = [-4.0]
@@ -12,5 +12,6 @@ using Test
   end
 
   f(x) = x[1] - cos(x[1])
-  r = optim_nlminb(start, f, verbose=false)
+  r = nlminb(start, f, verbose=false)
+  @test r["par"][1] == -1.5701006351106073
 end