{devel}[foss/2019a] PyTorch-Geometric v1.3.1 w/ Python 3.7.2, numba v0.43.1 w/ Python 2.7.15 3.7.2

easybuild/easyconfigs/g/googledrivedownloader/googledrivedownloader-0.4-GCCcore-8.2.0.eb

@@ -0,0 +1,31 @@
+easyblock = 'PythonPackage'
+
+name = 'googledrivedownloader'
+version = '0.4'
+
+homepage = 'https://github.com/ndrplz/google-drive-downloader'
+description = """Minimal class to download shared files from Google Drive."""
+
+toolchain = {'name': 'GCCcore', 'version': '8.2.0'}
+
+source_urls = [PYPI_SOURCE]
+
+sources = [SOURCE_TAR_GZ]
+
+checksums = ['4b34c1337b2ff3bf2bd7581818efbdcaea7d50ffd484ccf80809688f5ca0e204']
+
+multi_deps = {'Python': ['3.7.2', '2.7.15']}
+
+download_dep_fail = True
+use_pip = True
+
+options = {'modulename': 'google_drive_downloader'}
+
+sanity_check_paths = {
+    'files': [],
+    'dirs': ['lib/python%(pyshortver)s/site-packages'],
+}
+
+sanity_pip_check = True
+
+moduleclass = 'tools'

easybuild/easyconfigs/n/numba/numba-0.43.1-foss-2019a.eb

@@ -0,0 +1,52 @@
+easyblock = 'PythonBundle'
+
+name = 'numba'
+version = '0.43.1'
+
+homepage = 'http://numba.pydata.org/'
+description = """Numba is an Open Source NumPy-aware optimizing compiler for Python sponsored by Continuum Analytics,
+ Inc. It uses the remarkable LLVM compiler infrastructure to compile Python syntax to machine code."""
+
+toolchain = {'name': 'foss', 'version': '2019a'}
+toolchainopts = {'pic': True}
+
+multi_deps = {'Python': ['3.7.2', '2.7.15']}
+
+dependencies = [
+    ('SciPy-bundle', '2019.03'),
+    ('LLVM', '7.0.1'),
+]
+
+exts_default_options = {
+    'source_urls': [PYPI_SOURCE],
+    'use_pip': True,
+    'sanity_pip_check': True,
+}
+
+# required because we're building Python packages using Intel compilers on top of Python built with GCC
+check_ldshared = True
+
+exts_list = [
+    ('llvmlite', '0.28.0', {
+        'patches': ['llvmlite-0.26.0_fix-ffi-Makefile.patch'],
+        'checksums': [
+            'a189c0cd8a80e8bbd002a1e422b1efcc2bceab2cb63b961f2d03ab711c3ba45b',  # llvmlite-0.28.0.tar.gz
+            # llvmlite-0.26.0_fix-ffi-Makefile.patch
+            '40e6fe6de48709b45daebf8082f65ac26f73a4afdf58fc1e8099b97c575fecae',
+        ],
+    }),
+    (name, version, {
+        'checksums': ['e7789d473f332a17e40166d2960826d821edd75d148b4ed340a893a334b46fae'],
+    }),
+]
+
+fix_python_shebang_for = ['bin/*']
+
+sanity_check_paths = {
+    'files': ['bin/numba', 'bin/pycc'],
+    'dirs': ['lib/python%(pyshortver)s/site-packages'],
+}
+
+sanity_check_commands = ["numba --help"]
+
+moduleclass = 'lang'

easybuild/easyconfigs/p/PLYfile/PLYfile-0.7-foss-2019a.eb

@@ -0,0 +1,33 @@
+easyblock = 'PythonPackage'
+
+name = 'PLYfile'
+version = '0.7'
+
+homepage = 'https://github.com/dranjan/python-plyfile'
+description = """The plyfile Python module provides a simple facility for reading and writing ASCII
+and binary PLY files."""
+
+toolchain = {'name': 'foss', 'version': '2019a'}
+
+source_urls = [PYPI_SOURCE]
+
+sources = [SOURCELOWER_TAR_GZ]
+
+checksums = ['84ba5ee8c70a4924f64aa7edff5764b929f3b7842d53a3197d0b753818ad7089']
+
+multi_deps = {'Python': ['3.7.2', '2.7.15']}
+
+dependencies = [('SciPy-bundle', '2019.03')]
+
+download_dep_fail = True
+
+use_pip = True
+
+sanity_check_paths = {
+    'files': [],
+    'dirs': ['lib/python%(pyshortver)s/site-packages'],
+}
+
+sanity_pip_check = True
+
+moduleclass = 'tools'

easybuild/easyconfigs/p/PyTorch-Extensions/PyTorch-Extensions-2019.01-foss-2019a-Python-3.7.2.eb

@@ -0,0 +1,55 @@
+easyblock = 'PythonBundle'
+
+name = 'PyTorch-Extensions'
+version = '2019.01'
+versionsuffix = '-Python-%(pyver)s'
+
+homepage = 'https://github.com/rusty1s'
+description = """This is a bundle of extension libraries for PyTorch written by Matthias Fey."""
+
+toolchain = {'name': 'foss', 'version': '2019a'}
+
+builddependencies = [('binutils', '2.31.1')]
+dependencies = [
+    ('Python', '3.7.2'),
+    ('PyTorch', '1.3.1', versionsuffix),
+    ('scikit-learn', '0.20.3'),
+    ('scikit-image', '0.15.0', versionsuffix),
+    ('numba', '0.43.1'),
+    ('h5py', '2.9.0'),
+    ('RDFlib', '4.2.2'),
+    ('googledrivedownloader', '0.4'),
+    ('PLYfile', '0.7'),
+]
+
+exts_default_options = {
+    'source_urls': [PYPI_SOURCE],
+    'use_pip': True,
+    'download_dep_fail': True,
+    'sanity_pip_check': True,
+}
+
+exts_list = [
+    ('Torch-Scatter', '1.3.1', {
+        'source_tmpl': 'torch_scatter-%(version)s.tar.gz',
+        'checksums': ['54cbad248350165ddc921ded3fe7a69be5d30c6536273a1a3282e375289f86ec'],
+    }),
+    ('Torch-Sparse', '0.4.0', {
+        'source_tmpl': 'torch_sparse-%(version)s.tar.gz',
+        'checksums': ['bf217539b4f714a1d6fac4d39ace3ad8033871717f44f8f365a2746056b9d805'],
+    }),
+    ('Torch-Cluster', '1.4.4', {
+        'source_tmpl': 'torch_cluster-%(version)s.tar.gz',
+        'checksums': ['7907f3f270116cb299bdd4f88de497a85b3b34cf127910ffe0a6131e16620123'],
+    }),
+    ('Torch-Spline-conv', '1.1.0', {
+        'source_tmpl': 'torch_spline_conv-%(version)s.tar.gz',
+        'checksums': ['e6029526205d1f7cb535389bebd81decf0649a20ea6a67688c02bd335a7f9339'],
+    }),
+    ('Torch-Geometric', '1.3.1', {
+        'source_tmpl': 'torch_geometric-%(version)s.tar.gz',
+        'checksums': ['910ed5013955e24bb8e2c336f0e3feae3e122ea3c9913102e5ed14b1efbdf89b'],
+    }),
+]
+
+moduleclass = 'devel'