fix --sanity-check-only for MAGeCK v0.5.9.4

[boegel]

(created using eb --new-pr)

[boegel]

@boegelbot please test @ generoso

[boegelbot]

@boegel: Request for testing this PR well received on login1

PR test command 'EB_PR=18047 EB_ARGS= EB_CONTAINER= /opt/software/slurm/bin/sbatch --job-name test_PR_18047 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

• exit code: 0
• output:

Submitted batch job 10937

Test results coming soon (I hope)...

- notification for comment with ID 1578553885 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

[boegel]

Test report by @boegel
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
node3159.skitty.os - Linux RHEL 8.6, x86_64, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz (skylake_avx512), Python 3.6.8
See https://gist.github.com/boegel/b9eeef728e1ded0f29eede33a7485888 for a full test report.

[boegelbot]

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/eb306cebeff93ec9c7ab5646a3e81346 for a full test report.

[boegel]

@boegelbot please test @ generoso
EB_ARGS="--sanity-check-only"

[boegelbot]

@boegel: Request for testing this PR well received on login1

PR test command 'EB_PR=18047 EB_ARGS="--sanity-check-only" EB_CONTAINER= /opt/software/slurm/bin/sbatch --job-name test_PR_18047 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

• exit code: 0
• output:

Submitted batch job 10938

Test results coming soon (I hope)...

- notification for comment with ID 1578561010 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

[boegelbot]

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/8a71e4bbdf815f0f3d8d293802bc4161 for a full test report.

[boegel]

@boegelbot please test @ jsc-zen2

[boegelbot]

@boegel: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=18047 EB_ARGS= /opt/software/slurm/bin/sbatch --mem-per-cpu=4000M --job-name test_PR_18047 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

• exit code: 0
• output:

Submitted batch job 2723

Test results coming soon (I hope)...

- notification for comment with ID 1578594644 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

[boegelbot]

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/boegelbot/b2297ff1f813c49b4fe22a68b882aa1a for a full test report.

[casparvl]

Test report by @casparvl
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
tcn331.local.snellius.surf.nl - Linux Rocky Linux 8.7, x86_64, AMD EPYC 7H12 64-Core Processor, Python 3.6.8
See https://gist.github.com/casparvl/0bfe6ea44b9b5e3f87f5f52834eadbb6 for a full test report.

[casparvl]

Test report by @casparvl
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
tcn331.local.snellius.surf.nl - Linux Rocky Linux 8.7, x86_64, AMD EPYC 7H12 64-Core Processor, Python 3.6.8
See https://gist.github.com/casparvl/e5d4c4116176a3a01946c97eb533bb3d for a full test report.

[casparvl]

Lgtm, both clean installes and --sanity-check-only works with this.

[casparvl]

Going in, thanks @boegel!