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  1. hover_next_inference hover_next_inference Public

    Inference code for HoVer-NeXt

    Python 25 7

  2. hover_next_train hover_next_train Public

    Training/Evaluation code for HoVer-NeXt

    Python 9 3

  3. pT1-HBTG-MIDL2023 pT1-HBTG-MIDL2023 Public

    Code for MIDL 2023 publication "Tumor Budding T-cell Graphs: Assessing the Need for Resection in pT1 Colorectal Cancer Patients"

    Python 3

  4. BT-graph-creation BT-graph-creation Public

    Scripts to parse ASAP overlays to xmls and graphs

    Python 2 1

  5. scorenado scorenado Public

    A customizable, user-friendly and open-source visual assessment tool for histological slides

    PHP 1

  6. qupath-scripts qupath-scripts Public

    Collection of QuPath scripts

    Groovy

Repositories

Showing 8 of 8 repositories
  • hover_next_train Public

    Training/Evaluation code for HoVer-NeXt

    digitalpathologybern/hover_next_train’s past year of commit activity
    Python 9 GPL-3.0 3 1 0 Updated Jan 6, 2025
  • MxIF-pipeline Public
    digitalpathologybern/MxIF-pipeline’s past year of commit activity
    Python 0 0 0 0 Updated Dec 11, 2024
  • GrEp Public

    Inference code for GrEp : Graph-based epithelial cell sub-classification refinement

    digitalpathologybern/GrEp’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Nov 19, 2024
  • hover_next_inference Public

    Inference code for HoVer-NeXt

    digitalpathologybern/hover_next_inference’s past year of commit activity
    Python 25 GPL-3.0 7 1 0 Updated Sep 13, 2024
  • qupath-scripts Public

    Collection of QuPath scripts

    digitalpathologybern/qupath-scripts’s past year of commit activity
    Groovy 0 BSD-3-Clause 0 0 0 Updated Mar 28, 2024
  • pT1-HBTG-MIDL2023 Public

    Code for MIDL 2023 publication "Tumor Budding T-cell Graphs: Assessing the Need for Resection in pT1 Colorectal Cancer Patients"

    digitalpathologybern/pT1-HBTG-MIDL2023’s past year of commit activity
    Python 3 Apache-2.0 0 1 0 Updated May 15, 2023
  • BT-graph-creation Public

    Scripts to parse ASAP overlays to xmls and graphs

    digitalpathologybern/BT-graph-creation’s past year of commit activity
    Python 2 MIT 1 0 0 Updated Apr 26, 2023
  • scorenado Public

    A customizable, user-friendly and open-source visual assessment tool for histological slides

    digitalpathologybern/scorenado’s past year of commit activity
    PHP 0 MIT 1 0 0 Updated Nov 23, 2022

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